Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 72-385 |
| Cow position: | chr13:30281384-30281055 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 76-355 |
| Cow position: | chr13:42059318-42059038 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 79-371 |
| Cow position: | chr13:1725869-1725572 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 79-387 |
| Cow position: | chr13:1640244-1639945 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 79-391 |
| Cow position: | chr13:10379441-10379760 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 80-373 |
| Cow position: | chr13:38352984-38352701 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 121 |
| Conread position: | 80-381 |
| Cow position: | chr13:4706141-4706448 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 121 |
| Conread position: | 80-394 |
| Cow position: | chr13:179759-179442 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 105, 14 |
| Conread position: | 80-395 |
| Cow position: | chr13:47287599-47287264 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 81-331 |
| Cow position: | chr13:510915-511164 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 81-383 |
| Cow position: | chr13:2790966-2790660 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 82-346 |
| Cow position: | chr13:53872142-53871876 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 82-383 |
| Cow position: | chr13:7000345-7000038 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 83-377 |
| Cow position: | chr13:53935149-53934855 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 84-394 |
| Cow position: | chr13:9131043-9131353 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 26, 236 |
| Conread position: | 94-383 |
| Cow position: | chr13:60919186-60918893 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 95-383 |
| Cow position: | chr13:11570413-11570711 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 99-387 |
| Cow position: | chr13:3800613-3800324 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 112-395 |
| Cow position: | chr13:52078073-52077783 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 118 |
| Conread position: | 125-367 |
| Cow position: | chr13:9716477-9716230 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 125-397 |
| Cow position: | chr13:20490073-20490342 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 210-397 |
| Cow position: | chr13:60903045-60903231 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 225-372 |
| Cow position: | chr13:11252139-11252283 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 245-390 |
| Cow position: | chr13:8498821-8498678 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 13 |
Show alignments to all cow chromosomes.