Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 58-269 |
| Cow position: | chr15:38003485-38003690 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 60-398 |
| Cow position: | chr15:49301838-49302179 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 66-364 |
| Cow position: | chr15:47339772-47340092 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 79-237 |
| Cow position: | chr15:5290797-5290960 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 79-341 |
| Cow position: | chr15:41303537-41303270 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 79-385 |
| Cow position: | chr15:9734762-9735082 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 184 |
| Conread position: | 79-398 |
| Cow position: | chr15:31176607-31176278 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 79-399 |
| Cow position: | chr15:45729225-45729552 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 80-309 |
| Cow position: | chr15:15668953-15668717 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 80-390 |
| Cow position: | chr15:21341525-21341826 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 81-372 |
| Cow position: | chr15:43007279-43007586 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 191 |
| Conread position: | 82-383 |
| Cow position: | chr15:5653552-5653871 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 82-391 |
| Cow position: | chr15:24153126-24153439 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 84-229 |
| Cow position: | chr15:6642857-6643000 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 86-398 |
| Cow position: | chr15:2797627-2797945 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 99, 86 |
| Conread position: | 88-294 |
| Cow position: | chr15:15644320-15644533 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 96-366 |
| Cow position: | chr15:40991740-40991464 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 101-406 |
| Cow position: | chr15:39580761-39580467 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 17, 138 |
| Conread position: | 102-356 |
| Cow position: | chr15:43932424-43932160 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 109-399 |
| Cow position: | chr15:19838882-19839172 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 111-384 |
| Cow position: | chr15:28153215-28153487 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 63 |
| Conread position: | 112-339 |
| Cow position: | chr15:19810950-19811173 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 125-395 |
| Cow position: | chr15:23273127-23273409 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 128-399 |
| Cow position: | chr15:13056891-13057167 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 181-395 |
| Cow position: | chr15:31978419-31978196 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 223-352 |
| Cow position: | chr15:46468040-46468170 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 0 |
Show alignments to all cow chromosomes.