Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 66-397 |
| Cow position: | chr16:5455357-5455701 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 73-382 |
| Cow position: | chr16:49913089-49913400 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 174 |
| Conread position: | 75-398 |
| Cow position: | chr16:21138636-21138308 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 47, 212 |
| Conread position: | 78-397 |
| Cow position: | chr16:50519980-50519668 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 78-397 |
| Cow position: | chr16:51196342-51196663 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 79-289 |
| Cow position: | chr16:45232489-45232283 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 79-348 |
| Cow position: | chr16:36352062-36352329 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 95 |
| Conread position: | 79-361 |
| Cow position: | chr16:10659569-10659277 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 79-380 |
| Cow position: | chr16:55439973-55440248 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 198, 39 |
| Conread position: | 79-400 |
| Cow position: | chr16:5605491-5605819 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 82-228 |
| Cow position: | chr16:7568664-7568518 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 82-382 |
| Cow position: | chr16:46797320-46797037 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 82-394 |
| Cow position: | chr16:44666853-44667165 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 84-348 |
| Cow position: | chr16:12038677-12038957 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 84-372 |
| Cow position: | chr16:51416448-51416747 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 33, 275 |
| Conread position: | 85-301 |
| Cow position: | chr16:56164651-56164426 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 86-393 |
| Cow position: | chr16:25021363-25021671 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 197 |
| Conread position: | 87-385 |
| Cow position: | chr16:38179014-38178704 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 90-316 |
| Cow position: | chr16:40233438-40233197 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 28, 189 |
| Conread position: | 94-376 |
| Cow position: | chr16:15974809-15975097 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 112-278 |
| Cow position: | chr16:51481834-51481671 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 117, 62 |
| Conread position: | 140-391 |
| Cow position: | chr16:50660534-50660791 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 184-403 |
| Cow position: | chr16:47887663-47887881 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 196-399 |
| Cow position: | chr16:50348688-50348479 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 188 |
| Conread position: | 223-389 |
| Cow position: | chr16:41878076-41878238 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 225-390 |
| Cow position: | chr16:26669081-26668921 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 19 |
Show alignments to all cow chromosomes.