Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 73-291 |
| Cow position: | chr17:3889842-3890066 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 108 |
| Conread position: | 76-249 |
| Cow position: | chr17:12479194-12479011 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 77-298 |
| Cow position: | chr17:30414526-30414302 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 101, 74 |
| Conread position: | 79-393 |
| Cow position: | chr17:17652508-17652190 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 80-364 |
| Cow position: | chr17:9348954-9348659 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 80-375 |
| Cow position: | chr17:19366650-19366351 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 80-383 |
| Cow position: | chr17:39208395-39208700 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 80-385 |
| Cow position: | chr17:17085351-17085670 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 81-324 |
| Cow position: | chr17:24560125-24559875 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 82-335 |
| Cow position: | chr17:15115738-15115471 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 82-386 |
| Cow position: | chr17:17273795-17274101 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 88-307 |
| Cow position: | chr17:34322366-34322588 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 95-395 |
| Cow position: | chr17:17134809-17134506 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 105-399 |
| Cow position: | chr17:19404190-19404479 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 11 |
| Conread position: | 122-316 |
| Cow position: | chr17:26225273-26225476 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 126-329 |
| Cow position: | chr17:17155668-17155870 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 210-395 |
| Cow position: | chr17:34889600-34889413 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 240-401 |
| Cow position: | chr17:35439339-35439500 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 19 |
Show alignments to all cow chromosomes.