Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 66-391 |
| Cow position: | chr18:24503421-24503099 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 68-394 |
| Cow position: | chr18:51397558-51397888 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 80-394 |
| Cow position: | chr18:10107899-10107586 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 81-231 |
| Cow position: | chr18:30900048-30900200 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 81-395 |
| Cow position: | chr18:54084173-54084492 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 83-269 |
| Cow position: | chr18:34615258-34615445 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 84-393 |
| Cow position: | chr18:23743376-23743067 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 87-359 |
| Cow position: | chr18:55107224-55107495 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 86 |
| Conread position: | 95-394 |
| Cow position: | chr18:42248315-42248621 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 104-394 |
| Cow position: | chr18:55652806-55652513 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 112-393 |
| Cow position: | chr18:2698173-2697896 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 112-393 |
| Cow position: | chr18:43896082-43896355 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 118-375 |
| Cow position: | chr18:27522705-27522957 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 123-397 |
| Cow position: | chr18:46719625-46719346 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 101, 145 |
| Conread position: | 134-391 |
| Cow position: | chr18:17009580-17009320 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 204-408 |
| Cow position: | chr18:10118831-10118625 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 217-403 |
| Cow position: | chr18:16539318-16539132 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 144 |
| Conread position: | 219-399 |
| Cow position: | chr18:17028328-17028147 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 141 |
| Conread position: | 239-397 |
| Cow position: | chr18:224608-224766 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 101 |
Show alignments to all cow chromosomes.