Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 48-353 |
| Cow position: | chr20:42034760-42035072 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 79-222 |
| Cow position: | chr20:24648564-24648708 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 79-281 |
| Cow position: | chr20:26458885-26459092 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 80-348 |
| Cow position: | chr20:19304213-19304487 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 183 |
| Conread position: | 80-375 |
| Cow position: | chr20:17205213-17205498 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 80-389 |
| Cow position: | chr20:41958062-41957767 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 202, 120 |
| Conread position: | 81-342 |
| Cow position: | chr20:36937440-36937712 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 81-364 |
| Cow position: | chr20:22694708-22694993 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 82-332 |
| Cow position: | chr20:28798817-28798567 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 82-339 |
| Cow position: | chr20:35171847-35172106 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 83-390 |
| Cow position: | chr20:21831057-21831367 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 85-395 |
| Cow position: | chr20:16956513-16956842 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 88-391 |
| Cow position: | chr20:6446700-6447010 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 88-401 |
| Cow position: | chr20:28021413-28021093 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 253 |
| Conread position: | 104-380 |
| Cow position: | chr20:25584549-25584820 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 112-308 |
| Cow position: | chr20:7272592-7272396 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 112-395 |
| Cow position: | chr20:21260478-21260769 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 136-391 |
| Cow position: | chr20:39042992-39043237 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 160-368 |
| Cow position: | chr20:767925-768143 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 169-385 |
| Cow position: | chr20:21153056-21153268 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 110, 74 |
| Conread position: | 194-389 |
| Cow position: | chr20:27313856-27314054 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 213-398 |
| Cow position: | chr20:22651664-22651477 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 149 |
| Conread position: | 235-430 |
| Cow position: | chr20:22034222-22034026 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 284-390 |
| Cow position: | chr20:1745618-1745509 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.