Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 72-277 |
| Cow position: | chr24:44588155-44587942 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 191 |
| Conread position: | 72-333 |
| Cow position: | chr24:18416492-18416763 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 79-298 |
| Cow position: | chr24:122142-122365 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 79-387 |
| Cow position: | chr24:18793700-18793388 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 81-227 |
| Cow position: | chr24:25503911-25503764 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 81-381 |
| Cow position: | chr24:19614889-19614595 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 81-395 |
| Cow position: | chr24:3845508-3845192 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 81-399 |
| Cow position: | chr24:33579684-33579374 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 85-399 |
| Cow position: | chr24:29041095-29040778 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 86-398 |
| Cow position: | chr24:26574794-26574470 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 88-392 |
| Cow position: | chr24:3674514-3674214 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 120 |
| Conread position: | 89-387 |
| Cow position: | chr24:31421084-31420785 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 89-399 |
| Cow position: | chr24:14514484-14514792 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 96-360 |
| Cow position: | chr24:40638946-40638674 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 111-395 |
| Cow position: | chr24:28060245-28060529 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 11 |
| Conread position: | 146-395 |
| Cow position: | chr24:33526170-33526425 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 152-404 |
| Cow position: | chr24:9775770-9776017 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 218-399 |
| Cow position: | chr24:35653500-35653320 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 109 |
| Conread position: | 239-390 |
| Cow position: | chr24:10761028-10760878 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 243-394 |
| Cow position: | chr24:5944740-5944894 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.