Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 53-320 |
| Cow position: | chr25:12494552-12494819 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 55-394 |
| Cow position: | chr25:11962441-11962094 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 70-327 |
| Cow position: | chr25:16858553-16858813 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 74-395 |
| Cow position: | chr25:11849443-11849771 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 75-391 |
| Cow position: | chr25:29309494-29309172 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 251 |
| Conread position: | 76-342 |
| Cow position: | chr25:36632467-36632720 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 79-386 |
| Cow position: | chr25:31676979-31676674 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 174, 38 |
| Conread position: | 79-395 |
| Cow position: | chr25:17418123-17418431 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 79-399 |
| Cow position: | chr25:31515819-31515491 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 35, 285 |
| Conread position: | 80-304 |
| Cow position: | chr25:3687248-3687021 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 82-333 |
| Cow position: | chr25:4078731-4078482 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 82-395 |
| Cow position: | chr25:21960760-21961077 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 91-329 |
| Cow position: | chr25:41052234-41051991 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 96-387 |
| Cow position: | chr25:12063432-12063716 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 96-394 |
| Cow position: | chr25:33094587-33094292 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 111-395 |
| Cow position: | chr25:16578159-16578446 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 114, 135 |
| Conread position: | 127-315 |
| Cow position: | chr25:20249474-20249278 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 146-399 |
| Cow position: | chr25:14959517-14959772 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 231-384 |
| Cow position: | chr25:41104112-41104264 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 10 |
Show alignments to all cow chromosomes.