Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 66-386 |
| Cow position: | chr4:5499501-5499170 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 66-392 |
| Cow position: | chr4:54106930-54107255 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 72-387 |
| Cow position: | chr4:58195001-58194684 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 75-319 |
| Cow position: | chr4:44737922-44737667 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 78-382 |
| Cow position: | chr4:13919842-13920151 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 78-385 |
| Cow position: | chr4:7584370-7584049 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 79-364 |
| Cow position: | chr4:34535090-34535354 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 79-383 |
| Cow position: | chr4:38938614-38938905 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 38, 130 |
| Conread position: | 79-385 |
| Cow position: | chr4:7879080-7879375 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 80-377 |
| Cow position: | chr4:53970569-53970268 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 151, 36 |
| Conread position: | 81-372 |
| Cow position: | chr4:30815328-30815033 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 148, 35 |
| Conread position: | 81-390 |
| Cow position: | chr4:3245232-3244923 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 149, 35 |
| Conread position: | 81-399 |
| Cow position: | chr4:5557571-5557238 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 82-384 |
| Cow position: | chr4:30489025-30488717 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 9, 96 |
| Conread position: | 82-395 |
| Cow position: | chr4:46280320-46280635 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 83-373 |
| Cow position: | chr4:42365981-42366265 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 88-256 |
| Cow position: | chr4:59613712-59613546 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 88-294 |
| Cow position: | chr4:31599376-31599166 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 186 |
| Conread position: | 88-348 |
| Cow position: | chr4:10579470-10579206 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 91-373 |
| Cow position: | chr4:48504069-48503789 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 121, 171 |
| Conread position: | 94-383 |
| Cow position: | chr4:44683935-44684223 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 95-376 |
| Cow position: | chr4:33294771-33295051 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 97-388 |
| Cow position: | chr4:7334158-7333861 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 20, 207 |
| Conread position: | 99-381 |
| Cow position: | chr4:46151221-46151511 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 109-347 |
| Cow position: | chr4:40364696-40364927 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 112-390 |
| Cow position: | chr4:30049033-30048761 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 103, 81 |
| Conread position: | 119-370 |
| Cow position: | chr4:21570882-21571143 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 78, 64 |
| Conread position: | 125-401 |
| Cow position: | chr4:20291217-20290939 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 140-384 |
| Cow position: | chr4:52013509-52013267 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 141-395 |
| Cow position: | chr4:29037483-29037226 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 159-321 |
| Cow position: | chr4:8188681-8188843 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 6 |
| Conread position: | 219-398 |
| Cow position: | chr4:5916285-5916107 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 224-375 |
| Cow position: | chr4:59884190-59884345 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 243-399 |
| Cow position: | chr4:32813417-32813576 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 133 |
| Conread position: | 249-407 |
| Cow position: | chr4:32838430-32838589 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 25 |
Show alignments to all cow chromosomes.