Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               2-583
               

               Cow position:
               chr15:33197328-33196763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               372
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               295, 37
               

               Conread position:
               33-484
               

               Cow position:
               chr15:47770408-47770856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               297
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               33-707
               

               Cow position:
               chr15:35578947-35578287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               686
               

               Alignm identity:
               421
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               131, 47
               

               Conread position:
               57-568
               

               Cow position:
               chr15:20245331-20244806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               337
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               63-708
               

               Cow position:
               chr15:689889-690535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               666
               

               Alignm identity:
               406
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               158-708
               

               Cow position:
               chr15:21960685-21961252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               358
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               220-659
               

               Cow position:
               chr15:5955238-5954798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               189, 88
               

               Conread position:
               270-708
               

               Cow position:
               chr15:42490490-42490948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               324-708
               

               Cow position:
               chr15:45886147-45886534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 165
               
Show alignments to all cow chromosomes.