Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               2-269
               

               Cow position:
               chr17:18326000-18325732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 80
               

               Conread position:
               55-708
               

               Cow position:
               chr17:13857459-13856794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               685
               

               Alignm identity:
               415
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               128, 8
               

               Conread position:
               63-708
               

               Cow position:
               chr17:11088404-11087749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               675
               

               Alignm identity:
               417
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               109, 46
               

               Conread position:
               105-706
               

               Cow position:
               chr17:18849056-18849671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               397
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               270-707
               

               Cow position:
               chr17:4163758-4163314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               270-708
               

               Cow position:
               chr17:3643321-3642861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               270-708
               

               Cow position:
               chr17:13929188-13929643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 49
               

               Conread position:
               490-708
               

               Cow position:
               chr17:18027008-18026782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.