Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 2-178 |
| Cow position: | chr2:19985214-19985038 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-372 |
| Cow position: | chr2:85362598-85362214 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 215, 117 |
| Conread position: | 2-688 |
| Cow position: | chr2:67015245-67014563 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 451 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 171, 26 |
| Conread position: | 10-628 |
| Cow position: | chr2:47583343-47582755 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 406 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 34-377 |
| Cow position: | chr2:50456958-50456608 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 185, 106 |
| Conread position: | 35-628 |
| Cow position: | chr2:52651825-52652423 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 64-708 |
| Cow position: | chr2:976321-975648 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 434 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 64-708 |
| Cow position: | chr2:47809965-47810640 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 430 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 70-708 |
| Cow position: | chr2:20027744-20028417 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 73 |
| Conread position: | 107-708 |
| Cow position: | chr2:283686-283063 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 398 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 113-707 |
| Cow position: | chr2:46537136-46536516 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 402 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 6, 75 |
| Conread position: | 143-708 |
| Cow position: | chr2:50984192-50983599 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 375 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 152-708 |
| Cow position: | chr2:28651186-28650598 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 232-625 |
| Cow position: | chr2:22136766-22136376 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 149, 34 |
| Conread position: | 270-688 |
| Cow position: | chr2:52680603-52681031 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 181, 57 |
| Conread position: | 274-500 |
| Cow position: | chr2:19984998-19984788 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 279-621 |
| Cow position: | chr2:44985226-44985559 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 330-708 |
| Cow position: | chr2:2102218-2101841 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 161, 46 |
| Conread position: | 332-704 |
| Cow position: | chr2:52152617-52152240 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 160 |
| Conread position: | 332-708 |
| Cow position: | chr2:44345950-44346345 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 159 |
| Conread position: | 438-708 |
| Cow position: | chr2:7211053-7211328 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 491-708 |
| Cow position: | chr2:19984763-19984548 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 130 |
| Conread position: | 497-691 |
| Cow position: | chr2:50456408-50456214 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 178, 153 |
Show alignments to all cow chromosomes.