Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               10-211
               

               Cow position:
               chr20:1016155-1015959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 23
               

               Conread position:
               37-706
               

               Cow position:
               chr20:8371430-8370772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               694
               

               Alignm identity:
               434
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               241, 37
               

               Conread position:
               107-708
               

               Cow position:
               chr20:5534452-5535081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               394
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               270-708
               

               Cow position:
               chr20:3270406-3270848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               436-704
               

               Cow position:
               chr20:8835766-8835500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               438-707
               

               Cow position:
               chr20:14012335-14012613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               440-706
               

               Cow position:
               chr20:22206412-22206677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 203
               
Show alignments to all cow chromosomes.