Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               2-269
               

               Cow position:
               chr21:4981858-4982123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               169, 180
               

               Conread position:
               58-691
               

               Cow position:
               chr21:21031322-21031973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               670
               

               Alignm identity:
               427
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               146, 53
               

               Conread position:
               89-698
               

               Cow position:
               chr21:13182953-13183568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               404
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               177, 28
               

               Conread position:
               139-708
               

               Cow position:
               chr21:34259538-34258967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               270-587
               

               Cow position:
               chr21:4297997-4298305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 139
               

               Conread position:
               270-708
               

               Cow position:
               chr21:30561604-30562065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               325-704
               

               Cow position:
               chr21:30165614-30165223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               413-708
               

               Cow position:
               chr21:2789037-2788729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               463-706
               

               Cow position:
               chr21:28495006-28495257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 57
               
Show alignments to all cow chromosomes.