Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               24-269
               

               Cow position:
               chr22:13677334-13677079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               181, 131
               

               Conread position:
               64-708
               

               Cow position:
               chr22:17329332-17328649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               695
               

               Alignm identity:
               426
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               72-690
               

               Cow position:
               chr22:42746946-42747577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               133-708
               

               Cow position:
               chr22:39882678-39882086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               358
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               135-708
               

               Cow position:
               chr22:31312830-31313431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               611
               

               Alignm identity:
               377
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               269-708
               

               Cow position:
               chr22:18816753-18816295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               330-706
               

               Cow position:
               chr22:36267073-36267448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               494-693
               

               Cow position:
               chr22:46426980-46426783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               181, 10
               
Show alignments to all cow chromosomes.