Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 2-387 |
| Cow position: | chr25:14998171-14997817 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-317 |
| Cow position: | chr25:21544536-21544840 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 34-410 |
| Cow position: | chr25:18014843-18014473 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 54-349 |
| Cow position: | chr25:28028604-28028308 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 62-689 |
| Cow position: | chr25:28170545-28169901 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 404 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 175, 8 |
| Conread position: | 63-706 |
| Cow position: | chr25:12760117-12759469 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 383 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 292, 47 |
| Conread position: | 64-708 |
| Cow position: | chr25:13780485-13781162 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 414 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 65-706 |
| Cow position: | chr25:18224145-18223513 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 409 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 129, 54 |
| Conread position: | 77-587 |
| Cow position: | chr25:18288352-18287826 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 346 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 89-708 |
| Cow position: | chr25:18329600-18328973 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 405 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 27 |
| Conread position: | 102-688 |
| Cow position: | chr25:17615756-17615158 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 162-687 |
| Cow position: | chr25:25118503-25119033 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 270-708 |
| Cow position: | chr25:22147167-22147627 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 435-708 |
| Cow position: | chr25:17468845-17468566 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 442-632 |
| Cow position: | chr25:19429107-19428918 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 448-706 |
| Cow position: | chr25:17877901-17877637 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 490-706 |
| Cow position: | chr25:4761088-4760867 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 506-687 |
| Cow position: | chr25:536870-536694 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 170, 37 |
Show alignments to all cow chromosomes.