Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 2-370 |
| Cow position: | chr29:44467677-44468057 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 2-462 |
| Cow position: | chr29:10843652-10844124 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 2-587 |
| Cow position: | chr29:32731251-32731861 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 26 |
| Conread position: | 42-706 |
| Cow position: | chr29:36599890-36599233 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 430 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 223, 13 |
| Conread position: | 59-708 |
| Cow position: | chr29:49068-48378 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 427 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 64-708 |
| Cow position: | chr29:2099261-2099945 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 434 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 64-708 |
| Cow position: | chr29:26165403-26164722 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 426 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 64-708 |
| Cow position: | chr29:34800374-34799708 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 423 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 76-708 |
| Cow position: | chr29:39080279-39079612 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 424 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 106-708 |
| Cow position: | chr29:43322026-43322660 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 394 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 116-708 |
| Cow position: | chr29:35196164-35196767 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 373 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 158-705 |
| Cow position: | chr29:16176237-16175673 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 364 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 220-708 |
| Cow position: | chr29:11048881-11049379 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 248-708 |
| Cow position: | chr29:7431597-7431115 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 270-704 |
| Cow position: | chr29:2841725-2841273 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 270-708 |
| Cow position: | chr29:2689546-2690002 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 270-708 |
| Cow position: | chr29:32539451-32539910 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 294 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 270-708 |
| Cow position: | chr29:40503339-40502880 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 331-707 |
| Cow position: | chr29:16769837-16770222 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 84, 160 |
| Conread position: | 332-708 |
| Cow position: | chr29:39313884-39313491 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 82, 164 |
Show alignments to all cow chromosomes.