Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 2-637 |
| Cow position: | chr3:79433917-79433276 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 418 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 224, 64 |
| Conread position: | 2-704 |
| Cow position: | chr3:28930337-28929624 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 435 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 32-579 |
| Cow position: | chr3:18556379-18556924 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 362 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 174, 55 |
| Conread position: | 56-706 |
| Cow position: | chr3:25788653-25788027 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 429 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 145, 58 |
| Conread position: | 58-673 |
| Cow position: | chr3:78018832-78019476 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 410 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 64-708 |
| Cow position: | chr3:57485389-57484711 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 419 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 100-706 |
| Cow position: | chr3:53410320-53410928 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 382 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 107-708 |
| Cow position: | chr3:23292025-23291389 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 396 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 113-708 |
| Cow position: | chr3:43040287-43039688 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 124-706 |
| Cow position: | chr3:16867380-16866765 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 397 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 201-708 |
| Cow position: | chr3:14634599-14634094 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 324 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 237-708 |
| Cow position: | chr3:26574003-26573514 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 34, 218 |
| Conread position: | 240-708 |
| Cow position: | chr3:472069-472550 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 270-708 |
| Cow position: | chr3:72629629-72630087 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 270-708 |
| Cow position: | chr3:78027853-78027392 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 271-708 |
| Cow position: | chr3:594148-594593 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 142 |
| Conread position: | 271-708 |
| Cow position: | chr3:36882353-36881904 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 332-708 |
| Cow position: | chr3:9716435-9716832 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 527-708 |
| Cow position: | chr3:3806174-3806357 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.