Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               2-704
               

               Cow position:
               chr4:40406489-40405777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               732
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 46
               

               Conread position:
               23-337
               

               Cow position:
               chr4:44764486-44764802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               64-707
               

               Cow position:
               chr4:355053-355732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               690
               

               Alignm identity:
               424
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               107-706
               

               Cow position:
               chr4:41330623-41331258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               397
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               107-708
               

               Cow position:
               chr4:44724269-44724906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               648
               

               Alignm identity:
               401
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               135-708
               

               Cow position:
               chr4:4905373-4905969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               367
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               137-706
               

               Cow position:
               chr4:39272707-39272116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               376
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               269-706
               

               Cow position:
               chr4:43880471-43880930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               464-701
               

               Cow position:
               chr4:46029811-46030053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 160
               

               Conread position:
               473-708
               

               Cow position:
               chr4:17533280-17533037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 0
               
Show alignments to all cow chromosomes.