Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 6-707 |
| Cow position: | chr5:51861837-51861177 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 443 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 233, 101 |
| Conread position: | 25-569 |
| Cow position: | chr5:23456660-23457212 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 54 |
| Conread position: | 113-708 |
| Cow position: | chr5:416418-415805 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 375 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 149-708 |
| Cow position: | chr5:7273190-7273769 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 368 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 150-707 |
| Cow position: | chr5:26507781-26508356 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 372 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 67, 180 |
| Conread position: | 158-706 |
| Cow position: | chr5:14659761-14659179 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 375 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 214 |
| Conread position: | 159-707 |
| Cow position: | chr5:32674398-32673827 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 358 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 116 |
| Conread position: | 208-708 |
| Cow position: | chr5:36718027-36717521 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 335 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 270-687 |
| Cow position: | chr5:63480410-63479981 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 333 |
| Conread position: | 270-706 |
| Cow position: | chr5:29008818-29009270 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 223 |
| Conread position: | 270-708 |
| Cow position: | chr5:37731802-37732263 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 270-708 |
| Cow position: | chr5:49181743-49182186 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 130, 86 |
| Conread position: | 318-708 |
| Cow position: | chr5:26769327-26769727 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 435-706 |
| Cow position: | chr5:6188202-6188476 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 241 |
| Conread position: | 436-706 |
| Cow position: | chr5:28335195-28334916 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 436-708 |
| Cow position: | chr5:28031121-28031394 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 437-706 |
| Cow position: | chr5:70601841-70602106 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 152 |
| Conread position: | 448-706 |
| Cow position: | chr5:32249708-32249962 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 24 |
Show alignments to all cow chromosomes.