Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               2-706
               

               Cow position:
               chr6:6837992-6838711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               740
               

               Alignm identity:
               468
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               15-626
               

               Cow position:
               chr6:60384329-60384954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               397
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 103
               

               Conread position:
               23-690
               

               Cow position:
               chr6:50137961-50138636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               703
               

               Alignm identity:
               457
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               100-706
               

               Cow position:
               chr6:525699-526295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               364
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               210, 55
               

               Conread position:
               157-708
               

               Cow position:
               chr6:19453407-19453976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               356
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               166-708
               

               Cow position:
               chr6:59919778-59919219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               347
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               269-706
               

               Cow position:
               chr6:57010250-57009807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               413-708
               

               Cow position:
               chr6:65880622-65880926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               87, 68
               
Show alignments to all cow chromosomes.