Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 23-700 |
| Cow position: | chrX:1697677-1696984 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 449 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 109, 80 |
| Conread position: | 50-708 |
| Cow position: | chrX:15310040-15309364 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 54-353 |
| Cow position: | chrX:32010083-32009766 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 149, 104 |
| Conread position: | 67-706 |
| Cow position: | chrX:17885886-17886552 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 73 |
| Conread position: | 89-350 |
| Cow position: | chrX:26419976-26420243 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 99-706 |
| Cow position: | chrX:17615135-17614521 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 403 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 172, 17 |
| Conread position: | 113-708 |
| Cow position: | chrX:23392321-23391705 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 385 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 131-708 |
| Cow position: | chrX:23456271-23455684 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 368 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 135-536 |
| Cow position: | chrX:19189665-19190079 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 19 |
| Conread position: | 141-708 |
| Cow position: | chrX:40057752-40057171 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 357 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 142-706 |
| Cow position: | chrX:22894071-22893475 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 376 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 270-648 |
| Cow position: | chrX:21656577-21656963 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 115 |
| Conread position: | 270-691 |
| Cow position: | chrX:36646331-36646762 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 280-642 |
| Cow position: | chrX:27005096-27005448 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 332-707 |
| Cow position: | chrX:24122418-24122027 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 366 |
| Conread position: | 332-708 |
| Cow position: | chrX:22777815-22778206 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 411-708 |
| Cow position: | chrX:22583110-22582806 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 433-708 |
| Cow position: | chrX:28766872-28766588 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 438-610 |
| Cow position: | chrX:28583614-28583790 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 443-708 |
| Cow position: | chrX:15991583-15991317 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 463-673 |
| Cow position: | chrX:10455982-10456194 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 521-708 |
| Cow position: | chrX:21632883-21632693 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 106 |
Show alignments to all cow chromosomes.