Cow genome map
| Conread name: | Ss1.1-Emb1-C0005182_F21.5 |
| Conread position: | 2-309 |
| Cow position: | chr15:4795265-4795581 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 157 |
| Conread position: | 2-325 |
| Cow position: | chr15:4170113-4169778 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 3-309 |
| Cow position: | chr15:3037927-3037607 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-309 |
| Cow position: | chr15:4678076-4678381 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 3-320 |
| Cow position: | chr15:1662962-1663285 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 3-323 |
| Cow position: | chr15:7233895-7234223 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 3-324 |
| Cow position: | chr15:4961225-4961547 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 215 |
| Conread position: | 3-324 |
| Cow position: | chr15:7522905-7522574 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 3-346 |
| Cow position: | chr15:32693132-32693483 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 182 |
| Conread position: | 3-347 |
| Cow position: | chr15:7894627-7894289 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 3-347 |
| Cow position: | chr15:31358486-31358828 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 3-347 |
| Cow position: | chr15:36648495-36648852 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-361 |
| Cow position: | chr15:20357688-20357332 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 3-480 |
| Cow position: | chr15:32679966-32679506 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 137 |
| Conread position: | 3-480 |
| Cow position: | chr15:36642208-36642681 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 343 |
| Conread position: | 4-344 |
| Cow position: | chr15:50124336-50123996 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 32 |
| Conread position: | 4-480 |
| Cow position: | chr15:35648635-35648168 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 7-347 |
| Cow position: | chr15:4733448-4733802 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 175 |
| Conread position: | 9-317 |
| Cow position: | chr15:3010243-3009937 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 11-177 |
| Cow position: | chr15:22204503-22204340 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 11-317 |
| Cow position: | chr15:4811933-4812232 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 21-324 |
| Cow position: | chr15:35747899-35748213 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 26-324 |
| Cow position: | chr15:10787508-10787209 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 36-480 |
| Cow position: | chr15:370051-369614 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 202 |
| Conread position: | 38-349 |
| Cow position: | chr15:6078374-6078684 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 38-408 |
| Cow position: | chr15:36627039-36626666 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 48-414 |
| Cow position: | chr15:686171-686530 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 51-324 |
| Cow position: | chr15:2076293-2076567 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 51-345 |
| Cow position: | chr15:7933995-7934275 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 52-176 |
| Cow position: | chr15:10479048-10478925 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 52-187 |
| Cow position: | chr15:21816099-21815962 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-206 |
| Cow position: | chr15:21877710-21877555 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-250 |
| Cow position: | chr15:44828457-44828660 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 52-258 |
| Cow position: | chr15:22920772-22920979 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-275 |
| Cow position: | chr15:525204-524979 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-276 |
| Cow position: | chr15:7928267-7928486 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 52-277 |
| Cow position: | chr15:3261760-3261543 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 52-278 |
| Cow position: | chr15:38979566-38979792 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 200 |
| Conread position: | 52-285 |
| Cow position: | chr15:51800377-51800605 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 52-288 |
| Cow position: | chr15:6156307-6156070 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-304 |
| Cow position: | chr15:18333180-18332929 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 52-309 |
| Cow position: | chr15:1772146-1772403 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 52-309 |
| Cow position: | chr15:4921790-4922055 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 52-309 |
| Cow position: | chr15:7260274-7260530 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 52-309 |
| Cow position: | chr15:8099134-8099392 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 52-309 |
| Cow position: | chr15:14582971-14582715 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 238 |
| Conread position: | 52-309 |
| Cow position: | chr15:17080554-17080297 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 129 |
| Conread position: | 52-309 |
| Cow position: | chr15:20749062-20749320 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-309 |
| Cow position: | chr15:32494739-32494482 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 176 |
| Conread position: | 52-317 |
| Cow position: | chr15:444256-444522 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 190 |
| Conread position: | 52-317 |
| Cow position: | chr15:690437-690703 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 52-317 |
| Cow position: | chr15:1519502-1519236 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 52-317 |
| Cow position: | chr15:1763739-1764003 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 52-317 |
| Cow position: | chr15:2648009-2647742 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-317 |
| Cow position: | chr15:3888527-3888793 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 52-317 |
| Cow position: | chr15:4196110-4196377 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 52-317 |
| Cow position: | chr15:6593296-6593031 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 52-317 |
| Cow position: | chr15:37392148-37392405 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 52-317 |
| Cow position: | chr15:42320774-42320507 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-317 |
| Cow position: | chr15:50146725-50146992 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-318 |
| Cow position: | chr15:6472263-6472003 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 52-318 |
| Cow position: | chr15:53338680-53338937 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 52-323 |
| Cow position: | chr15:25789321-25789051 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 52-323 |
| Cow position: | chr15:29009490-29009758 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 52-323 |
| Cow position: | chr15:36970571-36970845 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-324 |
| Cow position: | chr15:4681877-4682152 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 52-324 |
| Cow position: | chr15:4764852-4765124 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 52-324 |
| Cow position: | chr15:7544527-7544801 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 52-324 |
| Cow position: | chr15:10888256-10888524 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 52-324 |
| Cow position: | chr15:21961154-21961427 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 52-325 |
| Cow position: | chr15:1781901-1782179 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-325 |
| Cow position: | chr15:1834812-1834536 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 52-325 |
| Cow position: | chr15:2011730-2012006 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 52-325 |
| Cow position: | chr15:6370131-6369856 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 52-325 |
| Cow position: | chr15:18268340-18268062 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-325 |
| Cow position: | chr15:28490494-28490216 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-331 |
| Cow position: | chr15:17292087-17292366 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 52-334 |
| Cow position: | chr15:35735102-35735388 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 263 |
| Conread position: | 52-345 |
| Cow position: | chr15:12421519-12421226 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 259 |
| Conread position: | 52-347 |
| Cow position: | chr15:8750074-8750368 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 52-347 |
| Cow position: | chr15:15347473-15347177 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 259 |
| Conread position: | 52-347 |
| Cow position: | chr15:51216236-51216530 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 52-361 |
| Cow position: | chr15:32672533-32672838 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 52-363 |
| Cow position: | chr15:24793695-24794010 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 52-381 |
| Cow position: | chr15:32733137-32732815 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 290, 82 |
| Conread position: | 52-381 |
| Cow position: | chr15:51671995-51672328 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 52-391 |
| Cow position: | chr15:17219224-17218888 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 52-395 |
| Cow position: | chr15:2007185-2007526 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 52-406 |
| Cow position: | chr15:24715874-24716220 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 52-411 |
| Cow position: | chr15:324592-324943 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 52-414 |
| Cow position: | chr15:1236967-1237328 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 52-414 |
| Cow position: | chr15:12614715-12615072 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 52-414 |
| Cow position: | chr15:21448948-21449319 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 52-414 |
| Cow position: | chr15:40105111-40105472 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 179 |
| Conread position: | 52-422 |
| Cow position: | chr15:8408200-8408572 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 173 |
| Conread position: | 53-250 |
| Cow position: | chr15:25186296-25186103 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 131 |
| Conread position: | 53-288 |
| Cow position: | chr15:6554207-6553972 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 189 |
| Conread position: | 53-311 |
| Cow position: | chr15:2924538-2924792 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 53-323 |
| Cow position: | chr15:4630268-4630001 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 143 |
| Conread position: | 53-324 |
| Cow position: | chr15:6277610-6277340 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 53-338 |
| Cow position: | chr15:16542317-16542600 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 201 |
| Conread position: | 54-288 |
| Cow position: | chr15:42936362-42936597 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 54-288 |
| Cow position: | chr15:44069571-44069806 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 54-304 |
| Cow position: | chr15:17039603-17039358 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 54-304 |
| Cow position: | chr15:18576369-18576613 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 54-304 |
| Cow position: | chr15:19738404-19738154 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 54-309 |
| Cow position: | chr15:4384916-4385172 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-309 |
| Cow position: | chr15:7836892-7837148 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 54-309 |
| Cow position: | chr15:24294740-24294996 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-310 |
| Cow position: | chr15:35753949-35753693 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 55-393 |
| Cow position: | chr15:11624560-11624893 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 60-288 |
| Cow position: | chr15:21666092-21665863 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 60-323 |
| Cow position: | chr15:4671080-4671347 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 16, 171 |
| Conread position: | 60-324 |
| Cow position: | chr15:7921986-7921723 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 109 |
| Conread position: | 60-331 |
| Cow position: | chr15:17271742-17271468 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 60-345 |
| Cow position: | chr15:41365835-41366116 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 122 |
| Conread position: | 60-347 |
| Cow position: | chr15:23157173-23156899 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 60-400 |
| Cow position: | chr15:6621995-6622331 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 61-235 |
| Cow position: | chr15:32722530-32722356 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 64-288 |
| Cow position: | chr15:42490863-42491087 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 64-323 |
| Cow position: | chr15:4143158-4142899 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 148 |
| Conread position: | 65-324 |
| Cow position: | chr15:4649486-4649746 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 66-382 |
| Cow position: | chr15:22151866-22152184 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 66-407 |
| Cow position: | chr15:17787507-17787164 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 201 |
| Conread position: | 68-248 |
| Cow position: | chr15:7788707-7788527 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 8, 116 |
| Conread position: | 72-392 |
| Cow position: | chr15:11299144-11298828 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 120, 187 |
| Conread position: | 73-421 |
| Cow position: | chr15:15265986-15265643 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 91 |
| Conread position: | 99-317 |
| Cow position: | chr15:2589771-2589557 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 212, 90 |
| Conread position: | 99-317 |
| Cow position: | chr15:2592132-2591918 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 212, 90 |
| Conread position: | 109-324 |
| Cow position: | chr15:8000527-8000314 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 126-317 |
| Cow position: | chr15:56209-56401 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 140-347 |
| Cow position: | chr15:6650254-6650056 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 173, 59 |
| Conread position: | 141-399 |
| Cow position: | chr15:5104171-5103917 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 207, 77 |
| Conread position: | 145-390 |
| Cow position: | chr15:12453157-12453396 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 150-421 |
| Cow position: | chr15:9429274-9429554 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 113, 259 |
| Conread position: | 158-347 |
| Cow position: | chr15:316112-315918 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 163-317 |
| Cow position: | chr15:32710452-32710607 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 163-324 |
| Cow position: | chr15:21623457-21623615 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 172-323 |
| Cow position: | chr15:1882737-1882585 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 139, 66 |
| Conread position: | 174-346 |
| Cow position: | chr15:5068620-5068792 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-345 |
| Cow position: | chr15:5544579-5544736 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 141 |
| Conread position: | 272-378 |
| Cow position: | chr15:51801566-51801673 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.