Cow genome map
| Conread name: | Ss1.1-Emb1-C0005182_F21.5 |
| Conread position: | 2-322 |
| Cow position: | chr26:12656284-12656598 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 3-309 |
| Cow position: | chr26:3691798-3692104 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 154 |
| Conread position: | 3-324 |
| Cow position: | chr26:12574405-12574081 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 3-338 |
| Cow position: | chr26:20262852-20263192 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 9-344 |
| Cow position: | chr26:2198644-2198980 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 27 |
| Conread position: | 11-349 |
| Cow position: | chr26:18852238-18852578 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 11-349 |
| Cow position: | chr26:18855107-18855447 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 51-325 |
| Cow position: | chr26:8869931-8870215 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 52-189 |
| Cow position: | chr26:20255107-20255247 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 52-249 |
| Cow position: | chr26:4334200-4334398 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-282 |
| Cow position: | chr26:23603711-23603481 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 52-308 |
| Cow position: | chr26:3030774-3030517 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 52-309 |
| Cow position: | chr26:5675214-5675472 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-309 |
| Cow position: | chr26:30589322-30589059 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 52-317 |
| Cow position: | chr26:2352303-2352038 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 52-317 |
| Cow position: | chr26:15144705-15144438 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 52-323 |
| Cow position: | chr26:12588509-12588236 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 203 |
| Conread position: | 52-324 |
| Cow position: | chr26:9112793-9113067 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-331 |
| Cow position: | chr26:6849381-6849102 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 258 |
| Conread position: | 52-342 |
| Cow position: | chr26:11254001-11253709 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 278 |
| Conread position: | 52-344 |
| Cow position: | chr26:30782798-30783097 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-345 |
| Cow position: | chr26:4605128-4604837 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 52-388 |
| Cow position: | chr26:8283006-8282670 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 163 |
| Conread position: | 52-398 |
| Cow position: | chr26:12666161-12666504 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 53-317 |
| Cow position: | chr26:8918906-8919172 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 53-327 |
| Cow position: | chr26:4806485-4806226 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 53-412 |
| Cow position: | chr26:9849869-9849509 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 146 |
| Conread position: | 53-412 |
| Cow position: | chr26:9853379-9853020 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 53-480 |
| Cow position: | chr26:9845522-9845110 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 54-288 |
| Cow position: | chr26:19351457-19351222 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-309 |
| Cow position: | chr26:9563300-9563045 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 54-347 |
| Cow position: | chr26:17396874-17396580 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 65-346 |
| Cow position: | chr26:1602127-1601843 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 178-341 |
| Cow position: | chr26:20255382-20255538 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.