Cow genome map
| Conread name: | Ss1.1-Emb1-C0005182_F21.5 |
| Conread position: | 2-282 |
| Cow position: | chr3:66990656-66990937 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 2-298 |
| Cow position: | chr3:70083790-70083487 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 2-308 |
| Cow position: | chr3:34396204-34395905 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 2-324 |
| Cow position: | chr3:9716669-9717003 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 256 |
| Conread position: | 2-345 |
| Cow position: | chr3:42580110-42579751 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-349 |
| Cow position: | chr3:55229841-55229483 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 3-230 |
| Cow position: | chr3:43039836-43039607 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 3-317 |
| Cow position: | chr3:32623166-32622850 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 3-324 |
| Cow position: | chr3:66638596-66638933 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-325 |
| Cow position: | chr3:6782244-6782582 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-341 |
| Cow position: | chr3:19938769-19939097 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 3-349 |
| Cow position: | chr3:24314335-24314691 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-373 |
| Cow position: | chr3:83234268-83233885 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 237 |
| Conread position: | 4-324 |
| Cow position: | chr3:31354403-31354072 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 5-317 |
| Cow position: | chr3:22335770-22336075 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 31 |
| Conread position: | 11-318 |
| Cow position: | chr3:47081775-47081471 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 11-349 |
| Cow position: | chr3:47179320-47178981 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 27-480 |
| Cow position: | chr3:48231118-48230662 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 41-304 |
| Cow position: | chr3:30929549-30929815 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 159 |
| Conread position: | 41-406 |
| Cow position: | chr3:77442793-77443150 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 47-414 |
| Cow position: | chr3:34093533-34093163 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 51-386 |
| Cow position: | chr3:60210255-60209932 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 143 |
| Conread position: | 52-179 |
| Cow position: | chr3:37968999-37969127 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-235 |
| Cow position: | chr3:57856657-57856841 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-237 |
| Cow position: | chr3:54864779-54864593 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 52-244 |
| Cow position: | chr3:46677994-46677798 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 52-250 |
| Cow position: | chr3:17828729-17828530 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-253 |
| Cow position: | chr3:32146170-32145970 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 22, 177 |
| Conread position: | 52-273 |
| Cow position: | chr3:5047264-5047042 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-279 |
| Cow position: | chr3:15989115-15988879 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-282 |
| Cow position: | chr3:18356967-18356736 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 52-288 |
| Cow position: | chr3:13518361-13518137 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 52-288 |
| Cow position: | chr3:18811424-18811660 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 52-288 |
| Cow position: | chr3:36882002-36881765 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 148 |
| Conread position: | 52-288 |
| Cow position: | chr3:64017444-64017207 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-304 |
| Cow position: | chr3:45895638-45895385 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-304 |
| Cow position: | chr3:45974417-45974670 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-304 |
| Cow position: | chr3:49545287-49545034 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-309 |
| Cow position: | chr3:594495-594754 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-309 |
| Cow position: | chr3:5995776-5995519 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-309 |
| Cow position: | chr3:56340507-56340249 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-317 |
| Cow position: | chr3:2917381-2917648 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-317 |
| Cow position: | chr3:7158812-7158546 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 52-317 |
| Cow position: | chr3:7168714-7168979 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 52-317 |
| Cow position: | chr3:41211817-41211550 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-317 |
| Cow position: | chr3:49614057-49613790 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-318 |
| Cow position: | chr3:66891041-66890776 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 52-323 |
| Cow position: | chr3:36117596-36117857 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 52-323 |
| Cow position: | chr3:64028165-64027892 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 52-323 |
| Cow position: | chr3:68700049-68699779 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 52-324 |
| Cow position: | chr3:2654026-2654295 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 204 |
| Conread position: | 52-324 |
| Cow position: | chr3:5829708-5829436 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 52-324 |
| Cow position: | chr3:31898056-31897784 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 52-325 |
| Cow position: | chr3:3522941-3523219 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-325 |
| Cow position: | chr3:14439841-14439564 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-325 |
| Cow position: | chr3:18859340-18859612 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 52-325 |
| Cow position: | chr3:46861383-46861105 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-341 |
| Cow position: | chr3:58947378-58947665 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 252 |
| Conread position: | 52-341 |
| Cow position: | chr3:77423601-77423882 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 52-344 |
| Cow position: | chr3:45032661-45032960 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 52-346 |
| Cow position: | chr3:18463665-18463374 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 52-346 |
| Cow position: | chr3:42432151-42432445 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 52-346 |
| Cow position: | chr3:49677707-49678002 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 52-346 |
| Cow position: | chr3:51940496-51940210 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 279, 18 |
| Conread position: | 52-346 |
| Cow position: | chr3:64650546-64650848 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 52-347 |
| Cow position: | chr3:5954266-5953971 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 259 |
| Conread position: | 52-347 |
| Cow position: | chr3:26822578-26822291 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 52-347 |
| Cow position: | chr3:48060910-48060616 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 31 |
| Conread position: | 52-347 |
| Cow position: | chr3:57484807-57484515 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 52-347 |
| Cow position: | chr3:77474680-77474979 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 294 |
| Conread position: | 52-353 |
| Cow position: | chr3:26949431-26949734 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 52-390 |
| Cow position: | chr3:3054519-3054853 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 109 |
| Conread position: | 52-402 |
| Cow position: | chr3:19891060-19890717 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 52-402 |
| Cow position: | chr3:49333308-49333654 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 116, 237 |
| Conread position: | 52-413 |
| Cow position: | chr3:3980309-3980670 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 52-414 |
| Cow position: | chr3:4027191-4027557 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 52-439 |
| Cow position: | chr3:39326636-39327024 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 348 |
| Conread position: | 52-480 |
| Cow position: | chr3:6685380-6685796 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 178 |
| Conread position: | 52-480 |
| Cow position: | chr3:19802580-19802998 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 52-480 |
| Cow position: | chr3:24591720-24591301 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 52-480 |
| Cow position: | chr3:29595117-29595541 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 52-480 |
| Cow position: | chr3:52864553-52864120 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 232 |
| Conread position: | 52-480 |
| Cow position: | chr3:64358247-64357824 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 53-287 |
| Cow position: | chr3:50915225-50915462 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 53-297 |
| Cow position: | chr3:19943980-19944216 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 53-317 |
| Cow position: | chr3:56321237-56321502 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 141 |
| Conread position: | 53-324 |
| Cow position: | chr3:2633846-2634113 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 202 |
| Conread position: | 53-324 |
| Cow position: | chr3:57499601-57499353 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 53-444 |
| Cow position: | chr3:2908432-2908054 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 54-240 |
| Cow position: | chr3:38866320-38866504 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 54-288 |
| Cow position: | chr3:5883463-5883696 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 54-288 |
| Cow position: | chr3:18542486-18542251 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-288 |
| Cow position: | chr3:19757037-19756802 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-288 |
| Cow position: | chr3:40823309-40823544 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 54-297 |
| Cow position: | chr3:30314488-30314732 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-303 |
| Cow position: | chr3:53515535-53515785 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 54-304 |
| Cow position: | chr3:2711039-2710789 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 54-309 |
| Cow position: | chr3:23214139-23213884 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 54-309 |
| Cow position: | chr3:49137618-49137362 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 142 |
| Conread position: | 54-309 |
| Cow position: | chr3:72629991-72630248 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-309 |
| Cow position: | chr3:75041244-75040992 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 54-311 |
| Cow position: | chr3:23291484-23291226 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 54-323 |
| Cow position: | chr3:59861288-59861558 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 257 |
| Conread position: | 54-343 |
| Cow position: | chr3:10239571-10239859 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 268 |
| Conread position: | 54-347 |
| Cow position: | chr3:21182762-21182471 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 182 |
| Conread position: | 54-347 |
| Cow position: | chr3:34030976-34030683 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 54-347 |
| Cow position: | chr3:66620098-66620388 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 263, 40 |
| Conread position: | 54-347 |
| Cow position: | chr3:69933316-69933610 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 257 |
| Conread position: | 54-347 |
| Cow position: | chr3:78027488-78027194 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 257 |
| Conread position: | 60-324 |
| Cow position: | chr3:207237-206968 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 60-324 |
| Cow position: | chr3:66119583-66119848 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 60-325 |
| Cow position: | chr3:472460-472726 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 60-342 |
| Cow position: | chr3:50127952-50127670 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 23, 208 |
| Conread position: | 60-345 |
| Cow position: | chr3:40157577-40157291 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 60-345 |
| Cow position: | chr3:45869289-45869002 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 192 |
| Conread position: | 61-308 |
| Cow position: | chr3:19878587-19878835 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 61-386 |
| Cow position: | chr3:32842504-32842195 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 62-391 |
| Cow position: | chr3:19722691-19722362 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 65-341 |
| Cow position: | chr3:56396048-56396322 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 66-360 |
| Cow position: | chr3:36127325-36127621 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 292 |
| Conread position: | 66-422 |
| Cow position: | chr3:45775154-45774807 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 67-390 |
| Cow position: | chr3:54783475-54783806 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 68-390 |
| Cow position: | chr3:49162633-49162953 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 68-394 |
| Cow position: | chr3:42630951-42631276 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 69-323 |
| Cow position: | chr3:36864421-36864165 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 70-386 |
| Cow position: | chr3:21305243-21304925 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 136 |
| Conread position: | 72-321 |
| Cow position: | chr3:18729199-18728950 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 74-383 |
| Cow position: | chr3:24642735-24643035 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 148 |
| Conread position: | 74-421 |
| Cow position: | chr3:14754354-14754008 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 74 |
| Conread position: | 76-387 |
| Cow position: | chr3:28929693-28929386 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 80-361 |
| Cow position: | chr3:15178263-15178538 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 36 |
| Conread position: | 80-386 |
| Cow position: | chr3:42688546-42688852 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 78, 117 |
| Conread position: | 83-317 |
| Cow position: | chr3:68873802-68873568 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 175 |
| Conread position: | 83-346 |
| Cow position: | chr3:82541369-82541635 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 90-247 |
| Cow position: | chr3:17776045-17776201 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 119-317 |
| Cow position: | chr3:40340124-40339925 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 133-378 |
| Cow position: | chr3:26837760-26837519 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 39 |
| Conread position: | 140-282 |
| Cow position: | chr3:40997981-40998124 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 141-473 |
| Cow position: | chr3:63004723-63004402 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 148-317 |
| Cow position: | chr3:29331261-29331090 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 150-421 |
| Cow position: | chr3:36098700-36098427 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 151-480 |
| Cow position: | chr3:14632678-14632353 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 153-309 |
| Cow position: | chr3:7481210-7481054 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 161-324 |
| Cow position: | chr3:53713078-53713241 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-318 |
| Cow position: | chr3:37969130-37969234 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-361 |
| Cow position: | chr3:63241688-63241547 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-422 |
| Cow position: | chr3:4738897-4738699 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 291-480 |
| Cow position: | chr3:66990923-66991107 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 154, 0 |
Show alignments to all cow chromosomes.