Cow genome map
| Conread name: | Ss1.1-Emb1-C0005193_I07.5 |
| Conread position: | 87-446 |
| Cow position: | chr18:33064684-33064322 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 219, 233 |
| Conread position: | 91-304 |
| Cow position: | chr18:44817831-44818044 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-448 |
| Cow position: | chr18:53586489-53586129 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 92-375 |
| Cow position: | chr18:53560353-53560638 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 251, 262 |
| Conread position: | 92-404 |
| Cow position: | chr18:55066767-55066453 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 250, 262 |
| Conread position: | 92-404 |
| Cow position: | chr18:56493851-56494165 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 92-446 |
| Cow position: | chr18:56128212-56128569 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 92-451 |
| Cow position: | chr18:53560437-53560795 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 93-343 |
| Cow position: | chr18:55497278-55497028 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 223, 227 |
| Conread position: | 93-357 |
| Cow position: | chr18:42693872-42693608 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 121 |
| Conread position: | 93-373 |
| Cow position: | chr18:56128885-56129166 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 221, 227 |
| Conread position: | 93-375 |
| Cow position: | chr18:53635280-53634996 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 222, 227 |
| Conread position: | 93-386 |
| Cow position: | chr18:53610123-53609828 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 93-396 |
| Cow position: | chr18:56128717-56129022 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 93-397 |
| Cow position: | chr18:53610375-53610069 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 93-402 |
| Cow position: | chr18:33064762-33064451 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 93-403 |
| Cow position: | chr18:56329339-56329027 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 124, 133 |
| Conread position: | 93-414 |
| Cow position: | chr18:55497530-55497207 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 93-414 |
| Cow position: | chr18:56316477-56316800 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 93-415 |
| Cow position: | chr18:50848763-50849087 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 93-424 |
| Cow position: | chr18:56316561-56316894 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 93-446 |
| Cow position: | chr18:49022738-49023094 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 93-446 |
| Cow position: | chr18:53509330-53509686 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 205, 227 |
| Conread position: | 93-446 |
| Cow position: | chr18:53635952-53635596 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 93-446 |
| Cow position: | chr18:56329759-56329403 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 130, 143 |
| Conread position: | 93-447 |
| Cow position: | chr18:22844361-22844001 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 93-448 |
| Cow position: | chr18:56316225-56316583 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 94-375 |
| Cow position: | chr18:33064257-33063974 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 94-376 |
| Cow position: | chr18:53635699-53635415 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 94-394 |
| Cow position: | chr18:42792149-42792451 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 94-396 |
| Cow position: | chr18:42693955-42693651 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 243, 282 |
| Conread position: | 94-402 |
| Cow position: | chr18:52012350-52012040 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 220, 226 |
| Conread position: | 94-402 |
| Cow position: | chr18:56128466-56128776 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 96-376 |
| Cow position: | chr18:56316060-56316342 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 222, 205 |
| Conread position: | 97-446 |
| Cow position: | chr18:40306601-40306953 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 138 |
| Conread position: | 102-414 |
| Cow position: | chr18:56391582-56391268 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 112-414 |
| Cow position: | chr18:42724309-42724005 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 227, 276 |
| Conread position: | 112-446 |
| Cow position: | chr18:33064491-33064154 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 136-376 |
| Cow position: | chr18:42792107-42792349 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 145-380 |
| Cow position: | chr18:53586771-53586534 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 145-402 |
| Cow position: | chr18:52011879-52011620 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 86, 91 |
| Conread position: | 145-403 |
| Cow position: | chr18:56494240-56494500 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 91 |
| Conread position: | 145-414 |
| Cow position: | chr18:52012047-52011776 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 145-446 |
| Cow position: | chr18:53586939-53586635 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 171, 175 |
| Conread position: | 146-378 |
| Cow position: | chr18:56128182-56128416 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 88, 83 |
| Conread position: | 146-409 |
| Cow position: | chr18:56391454-56391189 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 170, 174 |
| Conread position: | 146-446 |
| Cow position: | chr18:49032733-49032430 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 90 |
| Conread position: | 147-434 |
| Cow position: | chr18:53635478-53635189 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 190, 252 |
| Conread position: | 147-434 |
| Cow position: | chr18:56128687-56128976 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 189, 252 |
| Conread position: | 148-325 |
| Cow position: | chr18:50282157-50282334 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-379 |
| Cow position: | chr18:53610236-53610003 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 148-408 |
| Cow position: | chr18:56330040-56329778 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 148-415 |
| Cow position: | chr18:49022709-49022978 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 187, 214 |
| Conread position: | 148-415 |
| Cow position: | chr18:49033067-49032798 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 172, 157 |
| Conread position: | 149-334 |
| Cow position: | chr18:56267312-56267127 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-368 |
| Cow position: | chr18:55067046-55066825 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 79 |
| Conread position: | 149-373 |
| Cow position: | chr18:52011791-52011565 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 171, 164 |
| Conread position: | 149-375 |
| Cow position: | chr18:14453956-14453728 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 149-375 |
| Cow position: | chr18:42744233-42744005 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 149-378 |
| Cow position: | chr18:14453224-14452993 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 149-402 |
| Cow position: | chr18:52012211-52011956 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 167, 171 |
| Conread position: | 149-404 |
| Cow position: | chr18:49033234-49032977 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 75, 79 |
| Conread position: | 149-404 |
| Cow position: | chr18:56267396-56267139 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 187, 235 |
| Conread position: | 149-408 |
| Cow position: | chr18:52012379-52012118 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 149-408 |
| Cow position: | chr18:56391283-56391022 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 149-408 |
| Cow position: | chr18:56391367-56391106 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 149-414 |
| Cow position: | chr18:49032394-49032127 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 149-414 |
| Cow position: | chr18:49032478-49032211 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 166, 170 |
| Conread position: | 149-414 |
| Cow position: | chr18:49032814-49032547 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 157, 170 |
| Conread position: | 149-414 |
| Cow position: | chr18:49033150-49032883 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 149-414 |
| Cow position: | chr18:52012127-52011860 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 149-414 |
| Cow position: | chr18:56329451-56329184 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 149-414 |
| Cow position: | chr18:56329535-56329268 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 75, 87 |
| Conread position: | 149-414 |
| Cow position: | chr18:56329787-56329520 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 156, 171 |
| Conread position: | 149-414 |
| Cow position: | chr18:56329955-56329688 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 149-425 |
| Cow position: | chr18:56391115-56390837 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 167, 171 |
| Conread position: | 149-434 |
| Cow position: | chr18:53610403-53610116 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 149-435 |
| Cow position: | chr18:56329367-56329079 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 149-448 |
| Cow position: | chr18:53586515-53586213 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 149-448 |
| Cow position: | chr18:56329619-56329317 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 86, 80 |
| Conread position: | 149-455 |
| Cow position: | chr18:50281822-50282130 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 188, 278 |
| Conread position: | 150-376 |
| Cow position: | chr18:50848988-50849216 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 150-378 |
| Cow position: | chr18:56316786-56317016 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 150-380 |
| Cow position: | chr18:33063949-33063717 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 150-380 |
| Cow position: | chr18:33064873-33064641 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 150-402 |
| Cow position: | chr18:33063865-33063611 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 150-404 |
| Cow position: | chr18:56316198-56316454 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 150-408 |
| Cow position: | chr18:50246142-50246402 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 150-414 |
| Cow position: | chr18:56316450-56316716 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 150-418 |
| Cow position: | chr18:56391921-56391651 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 150-430 |
| Cow position: | chr18:56316702-56316984 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 150-431 |
| Cow position: | chr18:56267479-56267196 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 80, 86 |
| Conread position: | 151-325 |
| Cow position: | chr18:55066540-55066366 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-342 |
| Cow position: | chr18:56248175-56247986 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 151-348 |
| Cow position: | chr18:55066792-55066594 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 151-375 |
| Cow position: | chr18:33092956-33092730 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 151, 146 |
| Conread position: | 151-375 |
| Cow position: | chr18:40306739-40306965 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-375 |
| Cow position: | chr18:42693562-42693336 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 151-375 |
| Cow position: | chr18:56128103-56128329 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 151-376 |
| Cow position: | chr18:42792374-42792601 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-376 |
| Cow position: | chr18:50848905-50849132 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 163, 169 |
| Conread position: | 151-376 |
| Cow position: | chr18:53636062-53635835 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 151-376 |
| Cow position: | chr18:56329113-56328886 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 151-379 |
| Cow position: | chr18:41197641-41197871 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 151-385 |
| Cow position: | chr18:53635390-53635154 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 151-388 |
| Cow position: | chr18:50058801-50058562 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-398 |
| Cow position: | chr18:50059137-50058888 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-402 |
| Cow position: | chr18:33064032-33063779 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-402 |
| Cow position: | chr18:49032644-49032391 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 151-402 |
| Cow position: | chr18:56316367-56316620 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 130, 124 |
| Conread position: | 151-404 |
| Cow position: | chr18:53586261-53586006 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 191, 203 |
| Conread position: | 151-408 |
| Cow position: | chr18:49033316-49033057 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 151-408 |
| Cow position: | chr18:56391197-56390938 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 165, 169 |
| Conread position: | 151-409 |
| Cow position: | chr18:55497640-55497380 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 77, 71 |
| Conread position: | 151-414 |
| Cow position: | chr18:40306319-40306584 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 151-414 |
| Cow position: | chr18:49032560-49032295 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 151-414 |
| Cow position: | chr18:50083768-50084033 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-414 |
| Cow position: | chr18:50083852-50084117 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 189, 238 |
| Conread position: | 151-414 |
| Cow position: | chr18:56128439-56128704 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-414 |
| Cow position: | chr18:56329197-56328932 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-414 |
| Cow position: | chr18:56494162-56494427 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 163, 168 |
| Conread position: | 151-415 |
| Cow position: | chr18:44398289-44398023 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 164, 168 |
| Conread position: | 151-415 |
| Cow position: | chr18:52447930-52448196 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 151-416 |
| Cow position: | chr18:42724522-42724255 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 151-416 |
| Cow position: | chr18:49032308-49032041 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 191, 199 |
| Conread position: | 151-431 |
| Cow position: | chr18:41949282-41949000 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 149 |
| Conread position: | 151-431 |
| Cow position: | chr18:42675171-42674889 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 161, 168 |
| Conread position: | 151-431 |
| Cow position: | chr18:49032980-49032698 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 151-432 |
| Cow position: | chr18:1418320-1418603 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 151-446 |
| Cow position: | chr18:50246395-50246693 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 151-449 |
| Cow position: | chr18:1417984-1418285 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 181, 176 |
| Conread position: | 155-356 |
| Cow position: | chr18:56329025-56328823 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 76, 81 |
| Conread position: | 156-415 |
| Cow position: | chr18:43048741-43048480 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 80 |
| Conread position: | 157-433 |
| Cow position: | chr18:53635300-53635023 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 180, 262 |
| Conread position: | 157-455 |
| Cow position: | chr18:56128865-56129164 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 180, 262 |
| Conread position: | 159-375 |
| Cow position: | chr18:53635550-53635332 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 159-403 |
| Cow position: | chr18:55497548-55497302 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 159-403 |
| Cow position: | chr18:56128615-56128861 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 159-414 |
| Cow position: | chr18:55497296-55497039 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 70, 77 |
| Conread position: | 159-415 |
| Cow position: | chr18:53609973-53609715 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 159-434 |
| Cow position: | chr18:53635718-53635441 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 161-378 |
| Cow position: | chr18:53635968-53635749 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 163-375 |
| Cow position: | chr18:55067116-55066902 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 61 |
| Conread position: | 163-403 |
| Cow position: | chr18:53610473-53610231 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 163-448 |
| Cow position: | chr18:56329857-56329569 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 154, 141 |
| Conread position: | 164-414 |
| Cow position: | chr18:56493839-56494091 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 152, 156 |
| Conread position: | 172-446 |
| Cow position: | chr18:56330184-56329907 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 173-414 |
| Cow position: | chr18:49033378-49033135 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 164, 222 |
| Conread position: | 180-431 |
| Cow position: | chr18:55497695-55497442 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 157, 0 |
Show alignments to all cow chromosomes.