Cow genome map
| Conread name: | Ss1.1-Emb1-C0005193_I07.5 |
| Conread position: | 92-378 |
| Cow position: | chr21:12608253-12607965 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 92-451 |
| Cow position: | chr21:12608841-12608479 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 207, 197 |
| Conread position: | 93-344 |
| Cow position: | chr21:12659762-12660015 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 47 |
| Conread position: | 93-404 |
| Cow position: | chr21:12659258-12659571 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 93-408 |
| Cow position: | chr21:12659678-12659995 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 93-409 |
| Cow position: | chr21:12608588-12608270 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 251, 0 |
| Conread position: | 93-409 |
| Cow position: | chr21:12659426-12659744 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 93-414 |
| Cow position: | chr21:12659006-12659329 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 93-414 |
| Cow position: | chr21:12659594-12659917 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 94-408 |
| Cow position: | chr21:12608755-12608439 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 141, 137 |
| Conread position: | 111-448 |
| Cow position: | chr21:12608318-12607978 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 232, 307 |
| Conread position: | 135-448 |
| Cow position: | chr21:12608462-12608146 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 150-375 |
| Cow position: | chr21:12608867-12608640 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 150-379 |
| Cow position: | chr21:12658979-12659210 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 150-391 |
| Cow position: | chr21:12608615-12608372 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 150-409 |
| Cow position: | chr21:12659231-12659492 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 151-404 |
| Cow position: | chr21:12659568-12659823 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 151-405 |
| Cow position: | chr21:34222820-34222564 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 162, 166 |
| Conread position: | 151-409 |
| Cow position: | chr21:12659148-12659408 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 135, 141 |
| Conread position: | 151-414 |
| Cow position: | chr21:12659400-12659665 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 188, 199 |
| Conread position: | 154-448 |
| Cow position: | chr21:12658815-12659112 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 13 |
Show alignments to all cow chromosomes.