Cow genome map
| Conread name: | Ss1.1-Emb1-C0005193_I07.5 |
| Conread position: | 93-379 |
| Cow position: | chr6:49428737-49429025 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 93-384 |
| Cow position: | chr6:49428905-49429198 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 93-414 |
| Cow position: | chr6:49428317-49428640 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 98, 103 |
| Conread position: | 93-438 |
| Cow position: | chr6:49429157-49429502 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 111-431 |
| Cow position: | chr6:49428587-49428909 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 145-384 |
| Cow position: | chr6:49341049-49341290 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 161, 174 |
| Conread position: | 150-342 |
| Cow position: | chr6:49340634-49340826 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-414 |
| Cow position: | chr6:49428542-49428808 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 189, 233 |
| Conread position: | 151-376 |
| Cow position: | chr6:49340971-49341198 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-384 |
| Cow position: | chr6:49340887-49341122 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 151-393 |
| Cow position: | chr6:49340719-49340963 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 151-397 |
| Cow position: | chr6:49340467-49340715 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 151-414 |
| Cow position: | chr6:49429047-49429312 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 151-431 |
| Cow position: | chr6:49429131-49429413 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 192, 205 |
| Conread position: | 151-448 |
| Cow position: | chr6:49428291-49428591 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 185, 233 |
| Conread position: | 151-448 |
| Cow position: | chr6:49428879-49429179 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 186, 253 |
| Conread position: | 161-414 |
| Cow position: | chr6:49428469-49428724 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 169-414 |
| Cow position: | chr6:49428224-49428472 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 6, 192 |
Show alignments to all cow chromosomes.