Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005193_I07.5
        

               Conread position:
               111-386
               

               Cow position:
               chrX:14181283-14181006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               145-431
               

               Cow position:
               chrX:13826891-13826603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 83
               

               Conread position:
               146-414
               

               Cow position:
               chrX:13826722-13826452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 82
               

               Conread position:
               148-376
               

               Cow position:
               chrX:25324939-25324709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               148-408
               

               Cow position:
               chrX:14181414-14181152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               149-404
               

               Cow position:
               chrX:13826551-13826294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               165, 171
               

               Conread position:
               149-415
               

               Cow position:
               chrX:14181329-14181061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               171, 167
               

               Conread position:
               149-455
               

               Cow position:
               chrX:13826635-13826327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               190, 233
               

               Conread position:
               151-376
               

               Cow position:
               chrX:25324768-25324541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               151-408
               

               Cow position:
               chrX:13826465-13826206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               97, 61
               
Show alignments to all cow chromosomes.