Cow genome map

Conread name: Ss1.1-Lng1-LNG010044D01.5

Conread position: 121-323
Cow position: chr3:40068031-40068233 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-323
Cow position: chr3:41086501-41086703 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 129-323
Cow position: chr3:41062633-41062439 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 322-451
Cow position: chr3:40035476-40035605 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 76

Conread position: 322-451
Cow position: chr3:40070814-40070943 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 114
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 322-451
Cow position: chr3:41006459-41006330 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 76

Conread position: 322-451
Cow position: chr3:41061916-41061787 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 120
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 449-563
Cow position: chr3:40038043-40038157 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 10

Conread position: 449-563
Cow position: chr3:40071846-40071960 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 449-563
Cow position: chr3:41060032-41059918 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 102
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 561-734
Cow position: chr3:40038357-40038533 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 561-756
Cow position: chr3:41055641-41055443 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 561-757
Cow position: chr3:40072228-40072427 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 754-999
Cow position: chr3:40073047-40073292 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 764-999
Cow position: chr3:41055092-41054857 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 998-1276
Cow position: chr3:41052307-41052029 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 998-1278
Cow position: chr3:40074145-40074425 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1000-1278
Cow position: chr3:40993439-40993161 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1005-1269
Cow position: chr3:40043034-40043298 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1272-1492
Cow position: chr3:40075064-40075284 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1281-1492
Cow position: chr3:41050625-41050414 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 91

Conread position: 1489-1594
Cow position: chr3:40075839-40075944 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1593-1789
Cow position: chr3:40076185-40076381 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1624-1782
Cow position: chr3:41047130-41046972 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1784-2863
Cow position: chr3:40077475-40078560 (view UCSC Genome Browser custom track)
Alignm length: 1111
Alignm identity: 793
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 244

Conread position: 2888-3050
Cow position: chr3:40078725-40078885 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 63

Show alignments to all cow chromosomes.