Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 286-728 |
| Cow position: | chr12:1401991-1402449 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 208 |
| Conread position: | 289-642 |
| Cow position: | chr12:6407141-6406785 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 289-642 |
| Cow position: | chr12:11097742-11098102 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-728 |
| Cow position: | chr12:1867973-1868419 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 296-480 |
| Cow position: | chr12:21311222-21311034 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 296-675 |
| Cow position: | chr12:43031866-43031486 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 296-684 |
| Cow position: | chr12:3360421-3360810 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 26, 242 |
| Conread position: | 296-684 |
| Cow position: | chr12:26141321-26141720 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 175 |
| Conread position: | 296-730 |
| Cow position: | chr12:21255141-21254695 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 296-756 |
| Cow position: | chr12:21207205-21207687 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 307 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 300-642 |
| Cow position: | chr12:27933426-27933085 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 300-728 |
| Cow position: | chr12:15951739-15951306 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 300-741 |
| Cow position: | chr12:2308-2770 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 32, 240 |
| Conread position: | 301-651 |
| Cow position: | chr12:42860301-42859946 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 193 |
| Conread position: | 306-728 |
| Cow position: | chr12:1137115-1137542 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 308-684 |
| Cow position: | chr12:34855639-34855263 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 321-634 |
| Cow position: | chr12:2840050-2839741 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 118 |
| Conread position: | 321-642 |
| Cow position: | chr12:25101529-25101201 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 228 |
| Conread position: | 322-756 |
| Cow position: | chr12:22255313-22255729 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 71 |
| Conread position: | 323-730 |
| Cow position: | chr12:21499659-21500078 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 324-642 |
| Cow position: | chr12:20998585-20998259 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 330-728 |
| Cow position: | chr12:22332164-22332578 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 333-628 |
| Cow position: | chr12:2282092-2282393 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 344-631 |
| Cow position: | chr12:3630749-3631028 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 35, 141 |
| Conread position: | 345-642 |
| Cow position: | chr12:21941338-21941636 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 123 |
| Conread position: | 346-567 |
| Cow position: | chr12:26947707-26947469 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 210 |
| Conread position: | 364-708 |
| Cow position: | chr12:8310762-8311121 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 364-728 |
| Cow position: | chr12:21901531-21901898 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 374-703 |
| Cow position: | chr12:14663020-14662681 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 225 |
| Conread position: | 424-756 |
| Cow position: | chr12:8982760-8982427 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 221, 87 |
Show alignments to all cow chromosomes.