Cow genome map
Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
Conread position: | 1-129 |
Cow position: | chr16:51685181-51685308 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 279-618 |
Cow position: | chr16:48626308-48626633 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 244 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 31, 84 |
Conread position: | 286-642 |
Cow position: | chr16:25340783-25341139 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 246 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 16, 51 |
Conread position: | 286-684 |
Cow position: | chr16:7676887-7676482 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 281 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 16, 163 |
Conread position: | 289-641 |
Cow position: | chr16:29045842-29046191 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 240 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 13, 157 |
Conread position: | 289-703 |
Cow position: | chr16:25440427-25440857 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 289 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 28 |
Conread position: | 289-703 |
Cow position: | chr16:25458663-25458232 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 290 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 13, 32 |
Conread position: | 289-712 |
Cow position: | chr16:8817294-8816857 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 296 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 13, 206 |
Conread position: | 289-730 |
Cow position: | chr16:1568636-1568185 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 305 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 13, 73 |
Conread position: | 289-730 |
Cow position: | chr16:23253688-23253235 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 302 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 13, 27 |
Conread position: | 289-730 |
Cow position: | chr16:24881876-24881421 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 299 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 13, 206 |
Conread position: | 294-728 |
Cow position: | chr16:40887446-40886990 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 296 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 90, 25 |
Conread position: | 296-675 |
Cow position: | chr16:28171542-28171153 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 257 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 26, 320 |
Conread position: | 296-756 |
Cow position: | chr16:31581-32041 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 303 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 26, 71 |
Conread position: | 298-752 |
Cow position: | chr16:54647156-54647617 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 301-642 |
Cow position: | chr16:10204591-10204243 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 236 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 21, 193 |
Conread position: | 301-642 |
Cow position: | chr16:12539097-12538754 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 235 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 86, 35 |
Conread position: | 301-642 |
Cow position: | chr16:28472272-28471925 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 237 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 35, 193 |
Conread position: | 301-756 |
Cow position: | chr16:5888328-5888779 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 316 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 79, 20 |
Conread position: | 303-644 |
Cow position: | chr16:32934981-32935308 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 232 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 14, 28 |
Conread position: | 303-730 |
Cow position: | chr16:31593081-31592635 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 191 |
Conread position: | 305-637 |
Cow position: | chr16:26518165-26517842 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 227 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 27, 41 |
Conread position: | 308-752 |
Cow position: | chr16:40297344-40296881 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 309 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 12, 194 |
Conread position: | 311-583 |
Cow position: | chr16:42740577-42740310 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 200 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 68, 34 |
Conread position: | 315-730 |
Cow position: | chr16:1430064-1430493 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 290 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 8, 180 |
Conread position: | 316-756 |
Cow position: | chr16:9457374-9457807 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 301 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 25, 29 |
Conread position: | 317-728 |
Cow position: | chr16:55112003-55111580 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 293 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 24, 28 |
Conread position: | 318-502 |
Cow position: | chr16:13017776-13017957 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 12, 24 |
Conread position: | 319-684 |
Cow position: | chr16:5918326-5918701 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 247 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 49, 295 |
Conread position: | 320-520 |
Cow position: | chr16:5589044-5589247 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 153 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 59, 169 |
Conread position: | 321-582 |
Cow position: | chr16:21185126-21185392 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 184 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 321-642 |
Cow position: | chr16:408187-407862 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 225 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 65, 171 |
Conread position: | 321-642 |
Cow position: | chr16:2728468-2728144 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 223 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 66, 172 |
Conread position: | 321-642 |
Cow position: | chr16:43898423-43898098 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 222 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 66, 122 |
Conread position: | 321-684 |
Cow position: | chr16:6942467-6942839 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 244 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 65, 292 |
Conread position: | 321-751 |
Cow position: | chr16:24155580-24155150 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 36 |
Conread position: | 321-756 |
Cow position: | chr16:51685293-51685739 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 170 |
Conread position: | 323-592 |
Cow position: | chr16:9929404-9929677 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 195 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 63, 7 |
Conread position: | 323-647 |
Cow position: | chr16:27004227-27004543 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 223 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 71, 23 |
Conread position: | 324-568 |
Cow position: | chr16:42051490-42051258 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 175 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 55, 21 |
Conread position: | 324-660 |
Cow position: | chr16:16687719-16688062 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 239 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 24, 74 |
Conread position: | 324-684 |
Cow position: | chr16:32605675-32606044 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 244 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 62, 289 |
Conread position: | 324-728 |
Cow position: | chr16:44964898-44965320 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 288 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 45, 128 |
Conread position: | 324-750 |
Cow position: | chr16:28438923-28438494 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 286 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 31, 24 |
Conread position: | 324-756 |
Cow position: | chr16:14669142-14669593 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 301 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 62, 32 |
Conread position: | 328-644 |
Cow position: | chr16:49236257-49235942 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 225 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 22, 10 |
Conread position: | 330-644 |
Cow position: | chr16:18688264-18687947 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 225 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 49, 95 |
Conread position: | 333-756 |
Cow position: | chr16:41559543-41559960 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 288 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 54, 11 |
Conread position: | 344-727 |
Cow position: | chr16:7905511-7905911 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 149 |
Conread position: | 345-728 |
Cow position: | chr16:23670715-23670327 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 258 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 28, 18 |
Conread position: | 346-641 |
Cow position: | chr16:15565620-15565920 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 210 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 29, 147 |
Conread position: | 346-703 |
Cow position: | chr16:19713978-19713613 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 247 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 31, 232 |
Conread position: | 346-728 |
Cow position: | chr16:20255437-20255042 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 265 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 31, 161 |
Conread position: | 346-733 |
Cow position: | chr16:29676435-29676034 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 121 |
Conread position: | 346-751 |
Cow position: | chr16:11052043-11052451 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 282 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 31, 112 |
Conread position: | 350-638 |
Cow position: | chr16:14422590-14422882 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 200 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 30, 95 |
Conread position: | 351-641 |
Cow position: | chr16:29031794-29032085 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 210 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 31, 60 |
Conread position: | 351-684 |
Cow position: | chr16:49257696-49257368 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 227 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 20, 188 |
Conread position: | 351-756 |
Cow position: | chr16:5660742-5661155 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 271 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 35, 108 |
Conread position: | 353-642 |
Cow position: | chr16:9777008-9777302 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 205 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 34, 140 |
Conread position: | 353-712 |
Cow position: | chr16:10437134-10437490 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 244 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 33, 140 |
Conread position: | 353-756 |
Cow position: | chr16:26662632-26663050 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 289 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 125, 107 |
Conread position: | 356-730 |
Cow position: | chr16:15491593-15491978 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 265 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 31, 50 |
Conread position: | 359-684 |
Cow position: | chr16:25157333-25157004 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 229 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 21, 52 |
Conread position: | 364-756 |
Cow position: | chr16:6549633-6549223 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 283 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 12, 128 |
Conread position: | 381-684 |
Cow position: | chr16:23982218-23982528 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 209 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 84, 110 |
Conread position: | 385-712 |
Cow position: | chr16:27734894-27734556 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 232 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 80, 106 |
Conread position: | 409-664 |
Cow position: | chr16:25293530-25293796 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 191 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 47, 137 |
Conread position: | 409-728 |
Cow position: | chr16:55080417-55080090 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 231 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 47, 77 |
Conread position: | 463-642 |
Cow position: | chr16:2411980-2411799 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 78 |
Conread position: | 475-756 |
Cow position: | chr16:52815623-52815339 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 209 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 18, 83 |
Conread position: | 519-756 |
Cow position: | chr16:13017950-13018209 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 183 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 538-728 |
Cow position: | chr16:41758396-41758210 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 149 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 99, 28 |
Show alignments to all cow chromosomes.