Cow genome map

Conread name: Ss1.1-LyN1-MLN01C120006.5

Conread position: 1-128
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 243-684
Cow position:
Alignm length: 451
Alignm identity: 208
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 210, 161

Conread position: 272-642
Cow position:
Alignm length: 378
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 221

Conread position: 289-581
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 203

Conread position: 289-730
Cow position:
Alignm length: 461
Alignm identity: 304
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 125

Conread position: 289-743
Cow position:
Alignm length: 487
Alignm identity: 318
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 218

Conread position: 289-744
Cow position:
Alignm length: 474
Alignm identity: 297
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 202

Conread position: 289-756
Cow position:
Alignm length: 495
Alignm identity: 328
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 27

Conread position: 291-666
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 34, 85

Conread position: 296-509
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 41

Conread position: 296-644
Cow position:
Alignm length: 351
Alignm identity: 224
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 240, 83

Conread position: 296-666
Cow position:
Alignm length: 383
Alignm identity: 248
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 23, 321

Conread position: 296-666
Cow position:
Alignm length: 377
Alignm identity: 249
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 54

Conread position: 296-666
Cow position:
Alignm length: 381
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 319

Conread position: 296-666
Cow position:
Alignm length: 378
Alignm identity: 244
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 164, 78

Conread position: 296-684
Cow position:
Alignm length: 400
Alignm identity: 262
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 118

Conread position: 296-684
Cow position:
Alignm length: 400
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 192

Conread position: 296-684
Cow position:
Alignm length: 402
Alignm identity: 264
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 26, 45

Conread position: 296-684
Cow position:
Alignm length: 396
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 83, 196

Conread position: 296-684
Cow position:
Alignm length: 401
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 58

Conread position: 296-684
Cow position:
Alignm length: 401
Alignm identity: 264
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 26, 319

Conread position: 296-730
Cow position:
Alignm length: 453
Alignm identity: 291
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 165

Conread position: 296-741
Cow position:
Alignm length: 474
Alignm identity: 298
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 190

Conread position: 298-668
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 24, 317

Conread position: 298-684
Cow position:
Alignm length: 396
Alignm identity: 259
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 274

Conread position: 298-730
Cow position:
Alignm length: 452
Alignm identity: 296
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 109

Conread position: 300-642
Cow position:
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 44

Conread position: 300-642
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 196

Conread position: 300-666
Cow position:
Alignm length: 374
Alignm identity: 263
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 16, 21

Conread position: 301-452
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 21

Conread position: 301-576
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 245

Conread position: 301-637
Cow position:
Alignm length: 344
Alignm identity: 238
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 35, 193

Conread position: 301-638
Cow position:
Alignm length: 346
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 261

Conread position: 301-642
Cow position:
Alignm length: 350
Alignm identity: 237
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 35, 193

Conread position: 301-666
Cow position:
Alignm length: 372
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 41

Conread position: 301-704
Cow position:
Alignm length: 416
Alignm identity: 274
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 86, 160

Conread position: 301-712
Cow position:
Alignm length: 428
Alignm identity: 287
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 19, 42

Conread position: 301-712
Cow position:
Alignm length: 429
Alignm identity: 287
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 193

Conread position: 301-728
Cow position:
Alignm length: 443
Alignm identity: 286
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 27

Conread position: 301-730
Cow position:
Alignm length: 451
Alignm identity: 301
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 51

Conread position: 303-756
Cow position:
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 35

Conread position: 304-756
Cow position:
Alignm length: 471
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 305-584
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 40, 15

Conread position: 305-665
Cow position:
Alignm length: 370
Alignm identity: 240
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 41

Conread position: 305-751
Cow position:
Alignm length: 465
Alignm identity: 289
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 52

Conread position: 306-567
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 150, 53

Conread position: 311-712
Cow position:
Alignm length: 420
Alignm identity: 278
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 18

Conread position: 312-478
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 16

Conread position: 316-703
Cow position:
Alignm length: 402
Alignm identity: 268
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 15

Conread position: 316-728
Cow position:
Alignm length: 435
Alignm identity: 290
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 22

Conread position: 317-728
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 61, 13

Conread position: 317-756
Cow position:
Alignm length: 451
Alignm identity: 303
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 62, 31

Conread position: 319-756
Cow position:
Alignm length: 453
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 167

Conread position: 320-733
Cow position:
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 21

Conread position: 321-727
Cow position:
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 246

Conread position: 321-730
Cow position:
Alignm length: 426
Alignm identity: 277
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 138

Conread position: 321-750
Cow position:
Alignm length: 440
Alignm identity: 288
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 29

Conread position: 321-756
Cow position:
Alignm length: 463
Alignm identity: 305
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 256

Conread position: 321-756
Cow position:
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 322-585
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 35, 16

Conread position: 323-728
Cow position:
Alignm length: 421
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 64

Conread position: 323-756
Cow position:
Alignm length: 453
Alignm identity: 298
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 44, 222

Conread position: 324-675
Cow position:
Alignm length: 361
Alignm identity: 245
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 7, 136

Conread position: 325-642
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 11, 222

Conread position: 325-756
Cow position:
Alignm length: 455
Alignm identity: 308
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 82

Conread position: 328-728
Cow position:
Alignm length: 424
Alignm identity: 288
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 170

Conread position: 329-728
Cow position:
Alignm length: 412
Alignm identity: 281
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 58, 113

Conread position: 329-728
Cow position:
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 330-640
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 243

Conread position: 330-733
Cow position:
Alignm length: 423
Alignm identity: 274
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 163

Conread position: 330-756
Cow position:
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 43

Conread position: 331-628
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 90

Conread position: 331-728
Cow position:
Alignm length: 414
Alignm identity: 284
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 134, 14

Conread position: 333-684
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 7

Conread position: 337-741
Cow position:
Alignm length: 423
Alignm identity: 287
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 9

Conread position: 338-677
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 31

Conread position: 338-755
Cow position:
Alignm length: 428
Alignm identity: 287
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 42, 195

Conread position: 341-726
Cow position:
Alignm length: 398
Alignm identity: 265
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 66

Conread position: 344-585
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 50, 113

Conread position: 345-665
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 37, 145

Conread position: 346-531
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 31

Conread position: 346-583
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 346-666
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 105, 196

Conread position: 346-728
Cow position:
Alignm length: 401
Alignm identity: 259
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 13

Conread position: 346-728
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 346-728
Cow position:
Alignm length: 400
Alignm identity: 265
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 224

Conread position: 346-742
Cow position:
Alignm length: 418
Alignm identity: 277
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 31, 198

Conread position: 346-756
Cow position:
Alignm length: 436
Alignm identity: 288
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 80

Conread position: 348-637
Cow position:
Alignm length: 293
Alignm identity: 195
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 25

Conread position: 348-684
Cow position:
Alignm length: 345
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 143

Conread position: 350-750
Cow position:
Alignm length: 417
Alignm identity: 279
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 178, 28

Conread position: 351-642
Cow position:
Alignm length: 301
Alignm identity: 174
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 73

Conread position: 352-733
Cow position:
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 227

Conread position: 352-756
Cow position:
Alignm length: 426
Alignm identity: 291
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 73

Conread position: 353-642
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 191

Conread position: 353-684
Cow position:
Alignm length: 342
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 247

Conread position: 353-712
Cow position:
Alignm length: 374
Alignm identity: 252
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 108

Conread position: 353-750
Cow position:
Alignm length: 419
Alignm identity: 280
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 29, 134

Conread position: 354-728
Cow position:
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 61

Conread position: 356-631
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 31, 106

Conread position: 356-728
Cow position:
Alignm length: 390
Alignm identity: 251
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 77

Conread position: 359-684
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 43

Conread position: 361-642
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 107, 16

Conread position: 362-727
Cow position:
Alignm length: 375
Alignm identity: 246
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 104

Conread position: 407-684
Cow position:
Alignm length: 285
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 409-756
Cow position:
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 81

Conread position: 412-741
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 111

Conread position: 416-756
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 53

Conread position: 425-748
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 40

Conread position: 427-756
Cow position:
Alignm length: 345
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 56

Conread position: 471-684
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 98

Conread position: 543-735
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 8

Show alignments to all cow chromosomes.