Cow genome map

Conread name: Ss1.1-LyN1-MLN01C120006.5

Conread position: 289-684
Cow position: chr22:19144195-19143791 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 243

Conread position: 289-752
Cow position: chr22:39470014-39469533 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 204

Conread position: 291-722
Cow position: chr22:8136699-8136246 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 299
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 55

Conread position: 291-756
Cow position: chr22:1321131-1321601 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 311
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 39, 48

Conread position: 296-642
Cow position: chr22:35672846-35672493 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 197

Conread position: 296-666
Cow position: chr22:44370104-44369732 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 175

Conread position: 296-675
Cow position: chr22:18476251-18475867 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 195

Conread position: 296-684
Cow position: chr22:693151-693540 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 267
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 6, 45

Conread position: 296-684
Cow position: chr22:3278840-3278445 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 6, 165

Conread position: 296-684
Cow position: chr22:24949339-24949738 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 319

Conread position: 296-684
Cow position: chr22:27310267-27309865 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 322

Conread position: 296-703
Cow position: chr22:5233787-5233373 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 275
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 165

Conread position: 296-707
Cow position: chr22:44489396-44489823 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 282
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 26, 283

Conread position: 296-730
Cow position: chr22:6984764-6985217 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 299
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 319

Conread position: 296-730
Cow position: chr22:10546160-10546607 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 296
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 26, 273

Conread position: 301-642
Cow position: chr22:31335515-31335171 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 19, 44

Conread position: 301-665
Cow position: chr22:44933495-44933867 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 35, 167

Conread position: 319-666
Cow position: chr22:10910318-10909969 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 219

Conread position: 319-673
Cow position: chr22:13772332-13772676 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 64, 19

Conread position: 320-665
Cow position: chr22:46585776-46585424 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 0

Conread position: 321-592
Cow position: chr22:5307653-5307931 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 173

Conread position: 321-642
Cow position: chr22:34167868-34168194 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 66, 223

Conread position: 321-663
Cow position: chr22:1046923-1047262 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 38

Conread position: 321-671
Cow position: chr22:44456848-44457209 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 66, 173

Conread position: 321-728
Cow position: chr22:33350704-33351129 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 269

Conread position: 321-730
Cow position: chr22:561162-560743 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 272
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 281

Conread position: 328-675
Cow position: chr22:20207639-20207283 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 16

Conread position: 328-756
Cow position: chr22:7277065-7277516 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 10

Conread position: 329-749
Cow position: chr22:871288-870877 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 58

Conread position: 330-642
Cow position: chr22:17329191-17328877 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 82

Conread position: 330-642
Cow position: chr22:44395328-44395643 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 105

Conread position: 330-730
Cow position: chr22:44353402-44352994 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 267
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 58, 163

Conread position: 334-666
Cow position: chr22:1285382-1285043 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 7

Conread position: 337-728
Cow position: chr22:1293939-1293536 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 91

Conread position: 345-590
Cow position: chr22:41420124-41419874 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 200

Conread position: 345-727
Cow position: chr22:309284-309674 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 92

Conread position: 346-583
Cow position: chr22:42771109-42771353 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 146

Conread position: 346-644
Cow position: chr22:37067347-37067050 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 74

Conread position: 346-728
Cow position: chr22:1318956-1319357 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 271
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 350-583
Cow position: chr22:36534399-36534160 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 351-689
Cow position: chr22:46636127-46635788 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 16

Conread position: 353-628
Cow position: chr22:21588901-21589181 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 29, 140

Conread position: 353-642
Cow position: chr22:31312913-31313203 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 140

Conread position: 356-641
Cow position: chr22:42990743-42991034 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 137

Conread position: 356-660
Cow position: chr22:41474753-41474454 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 96, 18

Conread position: 360-712
Cow position: chr22:36861953-36861590 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 105, 131

Conread position: 364-755
Cow position: chr22:118236-117824 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 274
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 214

Conread position: 374-752
Cow position: chr22:18816790-18816395 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 261
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 89, 116

Conread position: 395-756
Cow position: chr22:13737820-13737474 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 105, 41

Conread position: 412-642
Cow position: chr22:32485698-32485474 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 44

Conread position: 412-684
Cow position: chr22:4065270-4065549 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 199

Conread position: 414-678
Cow position: chr22:10964814-10965089 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 171

Conread position: 414-684
Cow position: chr22:1878425-1878700 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 73

Conread position: 446-727
Cow position: chr22:36267040-36267329 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 122

Conread position: 471-684
Cow position: chr22:34598368-34598581 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 51

Conread position: 512-728
Cow position: chr22:11782800-11782578 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 57

Conread position: 545-678
Cow position: chr22:8874732-8874867 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 21

Conread position: 569-756
Cow position: chr22:298542-298342 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 6

Conread position: 589-726
Cow position: chr22:41237701-41237848 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.