Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 289-642 |
| Cow position: | chr23:2715854-2716214 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 206 |
| Conread position: | 289-642 |
| Cow position: | chr23:15220390-15220035 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 289-642 |
| Cow position: | chr23:19489043-19489400 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-644 |
| Cow position: | chr23:4641117-4640760 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 289-684 |
| Cow position: | chr23:27399009-27399412 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 289-684 |
| Cow position: | chr23:28912916-28913320 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 289-712 |
| Cow position: | chr23:36031867-36031433 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 258 |
| Conread position: | 289-752 |
| Cow position: | chr23:4815581-4816063 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 289-752 |
| Cow position: | chr23:11777989-11778462 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 296-684 |
| Cow position: | chr23:4359347-4359738 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 26, 164 |
| Conread position: | 298-685 |
| Cow position: | chr23:28216803-28217199 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 24, 303 |
| Conread position: | 298-756 |
| Cow position: | chr23:19332883-19332413 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 299-567 |
| Cow position: | chr23:14966457-14966185 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 301-684 |
| Cow position: | chr23:3882179-3881790 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 21, 193 |
| Conread position: | 301-756 |
| Cow position: | chr23:34174704-34175177 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 187 |
| Conread position: | 305-665 |
| Cow position: | chr23:2796043-2795678 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 190 |
| Conread position: | 305-681 |
| Cow position: | chr23:19449541-19449928 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 306-752 |
| Cow position: | chr23:4888218-4888665 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 309-730 |
| Cow position: | chr23:16617310-16616887 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 315-684 |
| Cow position: | chr23:4434005-4434371 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 319-642 |
| Cow position: | chr23:20301748-20302077 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 320-642 |
| Cow position: | chr23:22147723-22147395 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 224 |
| Conread position: | 321-570 |
| Cow position: | chr23:14975225-14974978 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 164 |
| Conread position: | 321-578 |
| Cow position: | chr23:22876091-22875833 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 329-756 |
| Cow position: | chr23:2339951-2340392 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 331-733 |
| Cow position: | chr23:19017256-19017660 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 154 |
| Conread position: | 346-673 |
| Cow position: | chr23:5779524-5779189 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 199 |
| Conread position: | 346-728 |
| Cow position: | chr23:5875210-5874814 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 254 |
| Conread position: | 346-733 |
| Cow position: | chr23:4276520-4276920 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 36, 212 |
| Conread position: | 346-756 |
| Cow position: | chr23:7273228-7273637 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 151, 22 |
| Conread position: | 347-664 |
| Cow position: | chr23:31595616-31595291 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 348-728 |
| Cow position: | chr23:1025486-1025101 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 350-728 |
| Cow position: | chr23:3013197-3013606 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 272 |
| Conread position: | 353-640 |
| Cow position: | chr23:15525182-15525472 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 34, 140 |
| Conread position: | 353-642 |
| Cow position: | chr23:967779-967483 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 147 |
| Conread position: | 359-645 |
| Cow position: | chr23:1330711-1330424 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 364-730 |
| Cow position: | chr23:2765788-2765423 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 364-756 |
| Cow position: | chr23:989061-988647 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 374-756 |
| Cow position: | chr23:16481759-16481369 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 82, 110 |
| Conread position: | 381-730 |
| Cow position: | chr23:30636703-30636339 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 84, 110 |
| Conread position: | 385-756 |
| Cow position: | chr23:13508674-13509062 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 412-684 |
| Cow position: | chr23:31446444-31446723 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 199 |
| Conread position: | 415-666 |
| Cow position: | chr23:8980856-8980604 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 157 |
| Conread position: | 462-684 |
| Cow position: | chr23:2313557-2313329 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 148 |
| Conread position: | 463-675 |
| Cow position: | chr23:16616181-16615969 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 493-722 |
| Cow position: | chr23:7750105-7750345 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.