Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 1-128 |
| Cow position: | chr25:20493830-20493959 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-128 |
| Cow position: | chr25:24171491-24171618 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 289-581 |
| Cow position: | chr25:18302319-18302621 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 161 |
| Conread position: | 289-642 |
| Cow position: | chr25:13780583-13780936 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 289-642 |
| Cow position: | chr25:18890469-18890110 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 289-642 |
| Cow position: | chr25:22147041-22147399 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 127 |
| Conread position: | 289-665 |
| Cow position: | chr25:25506195-25506580 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 296-684 |
| Cow position: | chr25:20777346-20776947 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 6, 320 |
| Conread position: | 301-622 |
| Cow position: | chr25:8674487-8674800 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 301-666 |
| Cow position: | chr25:12760051-12759665 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 17, 21 |
| Conread position: | 301-675 |
| Cow position: | chr25:17589985-17589607 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 185 |
| Conread position: | 305-732 |
| Cow position: | chr25:19288774-19288348 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 306-536 |
| Cow position: | chr25:18172915-18173135 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 307-730 |
| Cow position: | chr25:26278842-26279270 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 127 |
| Conread position: | 310-724 |
| Cow position: | chr25:18092590-18093017 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 312-577 |
| Cow position: | chr25:23346118-23345862 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 16 |
| Conread position: | 315-756 |
| Cow position: | chr25:20493937-20494376 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 317-728 |
| Cow position: | chr25:11933945-11933523 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 321-684 |
| Cow position: | chr25:19916668-19917034 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 143 |
| Conread position: | 321-684 |
| Cow position: | chr25:35362840-35362472 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 65, 271 |
| Conread position: | 321-756 |
| Cow position: | chr25:18255775-18255332 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 321-756 |
| Cow position: | chr25:24171604-24172055 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 324-728 |
| Cow position: | chr25:18411699-18411286 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 55, 161 |
| Conread position: | 328-698 |
| Cow position: | chr25:26921817-26922193 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 272 |
| Conread position: | 330-756 |
| Cow position: | chr25:26866811-26867249 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 56, 216 |
| Conread position: | 338-756 |
| Cow position: | chr25:18276224-18275797 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 346-728 |
| Cow position: | chr25:11375742-11375345 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 256 |
| Conread position: | 360-730 |
| Cow position: | chr25:20629195-20629582 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 133 |
| Conread position: | 364-726 |
| Cow position: | chr25:18028006-18027625 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 385-733 |
| Cow position: | chr25:34656800-34656437 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 433-703 |
| Cow position: | chr25:33991364-33991084 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 462-728 |
| Cow position: | chr25:36240276-36240549 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 488-728 |
| Cow position: | chr25:18060836-18060586 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 546-756 |
| Cow position: | chr25:13454983-13454765 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 20 |
Show alignments to all cow chromosomes.