Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 289-684 |
| Cow position: | chr26:19351947-19351543 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 295-531 |
| Cow position: | chr26:34012590-34012835 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 296-579 |
| Cow position: | chr26:24201195-24201486 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 296-580 |
| Cow position: | chr26:19998060-19998351 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 296-582 |
| Cow position: | chr26:3031236-3030944 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 249 |
| Conread position: | 296-642 |
| Cow position: | chr26:30782342-30782691 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 296-666 |
| Cow position: | chr26:11254488-11254105 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 296-675 |
| Cow position: | chr26:2352775-2352396 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 296-675 |
| Cow position: | chr26:9112039-9112429 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 296-684 |
| Cow position: | chr26:12588987-12588593 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 297-756 |
| Cow position: | chr26:3074110-3074579 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 150 |
| Conread position: | 300-756 |
| Cow position: | chr26:8869457-8869934 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 301-642 |
| Cow position: | chr26:9563779-9563432 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 305-724 |
| Cow position: | chr26:20262452-20262880 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 231, 23 |
| Conread position: | 317-756 |
| Cow position: | chr26:5674765-5675216 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 320-644 |
| Cow position: | chr26:6516464-6516783 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 67, 105 |
| Conread position: | 321-684 |
| Cow position: | chr26:2198246-2198599 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 214, 65 |
| Conread position: | 346-567 |
| Cow position: | chr26:9846510-9846283 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 346-666 |
| Cow position: | chr26:3691428-3691758 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 107, 202 |
| Conread position: | 346-727 |
| Cow position: | chr26:23605284-23604878 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 92 |
| Conread position: | 346-728 |
| Cow position: | chr26:12574771-12574373 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 275 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 31, 249 |
| Conread position: | 349-684 |
| Cow position: | chr26:18854723-18855060 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 356-684 |
| Cow position: | chr26:20254710-20255040 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 358-642 |
| Cow position: | chr26:6850537-6850248 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 361-728 |
| Cow position: | chr26:12665629-12665994 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 151, 13 |
| Conread position: | 363-703 |
| Cow position: | chr26:15145115-15144765 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 237 |
| Conread position: | 364-728 |
| Cow position: | chr26:4605537-4605160 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 11, 151 |
| Conread position: | 369-655 |
| Cow position: | chr26:30675306-30675041 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 369-668 |
| Cow position: | chr26:16904437-16904730 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 462-666 |
| Cow position: | chr26:11537089-11536880 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 113 |
Show alignments to all cow chromosomes.