Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 1-129 |
| Cow position: | chr27:21288798-21288667 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 289-627 |
| Cow position: | chr27:27662397-27662741 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-641 |
| Cow position: | chr27:23334667-23335026 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 289-641 |
| Cow position: | chr27:26324317-26324677 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-642 |
| Cow position: | chr27:13897698-13898058 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-642 |
| Cow position: | chr27:14460953-14460594 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 315 |
| Conread position: | 289-684 |
| Cow position: | chr27:1208860-1209260 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 296-666 |
| Cow position: | chr27:15540841-15541217 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 308-677 |
| Cow position: | chr27:2364277-2364653 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 308-756 |
| Cow position: | chr27:28890256-28890719 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 310-644 |
| Cow position: | chr27:25116782-25117108 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 321-684 |
| Cow position: | chr27:16034855-16034484 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 65, 192 |
| Conread position: | 321-708 |
| Cow position: | chr27:9993654-9993268 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 65, 93 |
| Conread position: | 329-707 |
| Cow position: | chr27:5906580-5906961 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 351-728 |
| Cow position: | chr27:25999481-25999107 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 356-730 |
| Cow position: | chr27:25805305-25804921 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 358-756 |
| Cow position: | chr27:25002958-25002541 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 14, 239 |
| Conread position: | 364-642 |
| Cow position: | chr27:27051244-27051527 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 364-666 |
| Cow position: | chr27:16438914-16439212 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 378-756 |
| Cow position: | chr27:21288615-21288234 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 179 |
| Conread position: | 380-728 |
| Cow position: | chr27:15278467-15278106 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 83, 162 |
| Conread position: | 440-684 |
| Cow position: | chr27:24560876-24561123 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 108 |
Show alignments to all cow chromosomes.