Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 1-129 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 289-684 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-684 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 207 |
| Conread position: | 289-703 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 289-729 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-730 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 13, 207 |
| Conread position: | 289-752 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 313 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 13, 257 |
| Conread position: | 291-531 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 124 |
| Conread position: | 293-728 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 84, 7 |
| Conread position: | 296-666 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 26, 319 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 48 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 319 |
| Conread position: | 296-756 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 301-642 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 35, 244 |
| Conread position: | 301-642 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 193 |
| Conread position: | 301-712 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 284 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 35, 303 |
| Conread position: | 301-730 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 162 |
| Conread position: | 301-730 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 296 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 305-679 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 316-750 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 49 |
| Conread position: | 316-756 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 176 |
| Conread position: | 320-565 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 320-666 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 139 |
| Conread position: | 321-489 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 321-532 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 321-533 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 127, 53 |
| Conread position: | 321-673 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 172 |
| Conread position: | 321-730 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 17, 293 |
| Conread position: | 328-684 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 164 |
| Conread position: | 328-728 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 329-728 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 331-684 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 345-733 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 345-733 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 346-665 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 346-666 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 8, 148 |
| Conread position: | 346-672 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 147 |
| Conread position: | 348-619 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 348-728 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 35, 228 |
| Conread position: | 350-703 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 126, 30 |
| Conread position: | 351-664 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 355-609 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 356-579 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 23 |
| Conread position: | 356-642 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 37, 137 |
| Conread position: | 359-712 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 368-732 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 382-642 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 409-650 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 412-641 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 414-749 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 16, 148 |
| Conread position: | 488-728 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 490-725 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 491-756 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 507-733 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.