Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 1-129 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 98 |
| Conread position: | 1-129 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 289-567 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-582 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 289-584 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-598 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 168 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 20, 314 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 258 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 128 |
| Conread position: | 289-712 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 316 |
| Conread position: | 289-712 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 13, 311 |
| Conread position: | 289-730 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 291-756 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 161 |
| Conread position: | 294-756 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 310 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 296-567 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 296-662 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 296-666 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 296-678 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 280 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 35, 318 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 26, 319 |
| Conread position: | 296-756 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 316 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 26, 470 |
| Conread position: | 297-756 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 299-751 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 301-641 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 301-642 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 301-684 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 21, 159 |
| Conread position: | 301-712 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 303-619 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 305-669 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 308-561 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 187 |
| Conread position: | 311-669 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 312-752 |
| Cow position: | |
| Alignm length: | 462 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 316-665 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 316-728 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 316-756 |
| Cow position: | |
| Alignm length: | 459 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 220, 5 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 170 |
| Conread position: | 321-644 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 66, 97 |
| Conread position: | 321-666 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 296 |
| Conread position: | 321-668 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 321-684 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 65, 292 |
| Conread position: | 321-712 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 30, 173 |
| Conread position: | 321-730 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 321-730 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 66, 223 |
| Conread position: | 321-744 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 292 |
| Conread position: | 323-514 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 328-744 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 272 |
| Conread position: | 329-728 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 331-751 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 276 |
| Conread position: | 333-590 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 338-730 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 44, 262 |
| Conread position: | 342-642 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 151 |
| Conread position: | 345-756 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 346-756 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 31, 71 |
| Conread position: | 347-756 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 348-728 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 153 |
| Conread position: | 352-584 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 353-673 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 112, 20 |
| Conread position: | 359-641 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 393-743 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 153 |
| Conread position: | 409-756 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 465-756 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 471-675 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 472-728 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 478-666 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 507-750 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 509-750 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 545-756 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 142 |
Show alignments to all cow chromosomes.