Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 1-129 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 16-128 |
| Cow position: | |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 269-642 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 226 |
| Conread position: | 271-675 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 271-756 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 326 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 289-641 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-641 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 314 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 212 |
| Conread position: | 289-684 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 289-684 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 191 |
| Conread position: | 289-712 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 20, 119 |
| Conread position: | 289-712 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-730 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 300 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-752 |
| Cow position: | |
| Alignm length: | 487 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 296-582 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 296-582 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 296-666 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 93 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 26, 306 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 26, 165 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 320 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 26, 191 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 284 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 464 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 26, 306 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 321 |
| Conread position: | 296-741 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 132 |
| Conread position: | 297-663 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 301-583 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 301-642 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 305-572 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 305-684 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 17, 193 |
| Conread position: | 307-584 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 312-728 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 224, 74 |
| Conread position: | 316-722 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 72, 5 |
| Conread position: | 317-625 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 178 |
| Conread position: | 317-712 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 178 |
| Conread position: | 318-676 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 68, 153 |
| Conread position: | 319-573 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 320-592 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 320-642 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 62, 142 |
| Conread position: | 320-756 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 172 |
| Conread position: | 320-756 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 436 |
| Conread position: | 321-638 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 321-641 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 170 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 65, 172 |
| Conread position: | 321-685 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 212, 65 |
| Conread position: | 321-703 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 141 |
| Conread position: | 321-730 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 65, 102 |
| Conread position: | 321-751 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 321-756 |
| Cow position: | |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 322-740 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 323-528 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 64, 158 |
| Conread position: | 323-644 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 323-728 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 127, 22 |
| Conread position: | 328-562 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 328-728 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 330-665 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 52, 194 |
| Conread position: | 330-673 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 50, 155 |
| Conread position: | 330-728 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 334-712 |
| Cow position: | |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 339-756 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 341-712 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 191, 122 |
| Conread position: | 345-733 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 118, 76 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 34, 227 |
| Conread position: | 347-645 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 351-730 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 352-707 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 353-642 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 141 |
| Conread position: | 353-642 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 353-712 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 353-743 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 356-642 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 356-666 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 128 |
| Conread position: | 356-730 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 357-642 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 362-730 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 121 |
| Conread position: | 363-684 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 364-666 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 364-756 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 365-572 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 371-752 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 376-728 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 80, 114 |
| Conread position: | 378-728 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 140 |
| Conread position: | 378-733 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 170 |
| Conread position: | 381-663 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 156 |
| Conread position: | 412-647 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 413-751 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 421-716 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 471-728 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 482-756 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 538-756 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 549-756 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.