Cow genome map

Conread name: Ss1.1-LyN1-MLN01C120006.5

Conread position: 1-112
Cow position: chr7:25686709-25686599 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 12

Conread position: 1-129
Cow position: chr7:67653429-67653559 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 5-130
Cow position: chr7:65340198-65340072 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 11

Conread position: 287-641
Cow position: chr7:21235451-21235090 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 207

Conread position: 289-579
Cow position: chr7:1736614-1736319 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 26

Conread position: 289-584
Cow position: chr7:13538166-13537863 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 205

Conread position: 289-592
Cow position: chr7:38396788-38397100 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 207

Conread position: 289-642
Cow position: chr7:24808907-24808546 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 13, 206

Conread position: 289-684
Cow position: chr7:39791298-39791707 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 277
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 13, 319

Conread position: 289-712
Cow position: chr7:21984961-21985398 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 294
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 206

Conread position: 289-712
Cow position: chr7:67798418-67798849 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 284
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 40

Conread position: 289-752
Cow position: chr7:21128083-21127612 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 319
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 48

Conread position: 289-752
Cow position: chr7:64242375-64241899 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 320
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 205

Conread position: 289-756
Cow position: chr7:14140031-14139548 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 316
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 99

Conread position: 293-728
Cow position: chr7:27125729-27126182 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 306
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 100

Conread position: 293-756
Cow position: chr7:58378622-58378148 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 296-578
Cow position: chr7:6720116-6720403 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 198

Conread position: 296-684
Cow position: chr7:3235114-3234716 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 259
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 26, 52

Conread position: 296-684
Cow position: chr7:6649085-6648688 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 314

Conread position: 296-684
Cow position: chr7:25439105-25439487 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 253
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 164

Conread position: 296-684
Cow position: chr7:27102542-27102147 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 174

Conread position: 296-684
Cow position: chr7:47374565-47374964 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 319

Conread position: 296-684
Cow position: chr7:61558782-61559180 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 318

Conread position: 296-703
Cow position: chr7:17302-16881 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 263
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 92, 306

Conread position: 296-728
Cow position: chr7:27531290-27530847 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 146

Conread position: 296-730
Cow position: chr7:6643304-6642857 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 298
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 294

Conread position: 296-730
Cow position: chr7:11467158-11466718 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 304
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 50

Conread position: 298-592
Cow position: chr7:28635228-28635516 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 17

Conread position: 299-756
Cow position: chr7:52120507-52120032 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 293
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 53

Conread position: 301-642
Cow position: chr7:54602424-54602772 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 194

Conread position: 301-687
Cow position: chr7:27786207-27786594 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 258
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 192

Conread position: 301-756
Cow position: chr7:34485489-34485959 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 317
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 51

Conread position: 302-666
Cow position: chr7:3154361-3154729 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 14

Conread position: 303-631
Cow position: chr7:18962521-18962842 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 17

Conread position: 303-728
Cow position: chr7:68084396-68084807 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 42

Conread position: 306-704
Cow position: chr7:20307199-20306800 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 16

Conread position: 312-756
Cow position: chr7:65497195-65496752 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 321-451
Cow position: chr7:67653544-67653673 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 16

Conread position: 321-537
Cow position: chr7:31864458-31864669 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 17

Conread position: 321-581
Cow position: chr7:20429406-20429152 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 162

Conread position: 321-592
Cow position: chr7:34148706-34148980 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 121

Conread position: 321-719
Cow position: chr7:41876882-41876492 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 60, 39

Conread position: 321-722
Cow position: chr7:49290196-49290609 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 104

Conread position: 321-728
Cow position: chr7:750523-750949 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 193

Conread position: 321-728
Cow position: chr7:60857752-60857351 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 272
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 106

Conread position: 321-728
Cow position: chr7:63020452-63020872 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 274
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 73, 136

Conread position: 321-752
Cow position: chr7:46902478-46902031 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 66, 32

Conread position: 322-756
Cow position: chr7:26883741-26884179 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 303
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 124

Conread position: 323-666
Cow position: chr7:3301556-3301207 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 23

Conread position: 323-756
Cow position: chr7:7297273-7296826 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 157

Conread position: 328-577
Cow position: chr7:29371151-29370904 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 17

Conread position: 328-704
Cow position: chr7:25686603-25686232 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 124

Conread position: 330-531
Cow position: chr7:30156684-30156479 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 128

Conread position: 330-642
Cow position: chr7:55538312-55537996 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 163

Conread position: 330-666
Cow position: chr7:35287958-35287613 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 133

Conread position: 331-622
Cow position: chr7:522234-521943 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 134, 14

Conread position: 334-660
Cow position: chr7:26890416-26890742 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 49, 7

Conread position: 334-661
Cow position: chr7:39109100-39108781 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 7

Conread position: 344-750
Cow position: chr7:59027641-59028044 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 82

Conread position: 344-751
Cow position: chr7:51084240-51084654 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 62

Conread position: 345-530
Cow position: chr7:47050043-47050229 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 141

Conread position: 345-644
Cow position: chr7:51013595-51013892 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 72

Conread position: 346-632
Cow position: chr7:35297974-35297687 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 112

Conread position: 346-666
Cow position: chr7:48633029-48633343 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 77

Conread position: 346-728
Cow position: chr7:36084958-36085354 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 255
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 136, 13

Conread position: 346-728
Cow position: chr7:41870302-41869927 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 27

Conread position: 351-727
Cow position: chr7:62680030-62679628 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 353-642
Cow position: chr7:20294499-20294793 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 34

Conread position: 359-653
Cow position: chr7:68858458-68858160 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 83

Conread position: 359-666
Cow position: chr7:29469498-29469811 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 125

Conread position: 361-728
Cow position: chr7:59136067-59136443 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 275

Conread position: 362-592
Cow position: chr7:68076178-68076406 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 116

Conread position: 362-684
Cow position: chr7:37416658-37416985 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 209

Conread position: 363-727
Cow position: chr7:54515470-54515102 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 122

Conread position: 367-747
Cow position: chr7:65340044-65339664 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 207

Conread position: 368-727
Cow position: chr7:102953-102584 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 38

Conread position: 374-756
Cow position: chr7:24055943-24056332 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 80, 41

Conread position: 375-728
Cow position: chr7:21976084-21975718 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 385-641
Cow position: chr7:51911690-51911432 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 107

Conread position: 387-712
Cow position: chr7:45949484-45949151 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 104

Conread position: 409-756
Cow position: chr7:30119853-30119490 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 411-750
Cow position: chr7:67811806-67812165 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 412-642
Cow position: chr7:11446245-11446477 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 54

Conread position: 429-728
Cow position: chr7:993939-994253 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 114

Conread position: 451-756
Cow position: chr7:23835850-23836171 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 462-733
Cow position: chr7:68436305-68436021 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 9

Conread position: 464-671
Cow position: chr7:67426161-67426371 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 76

Conread position: 467-756
Cow position: chr7:6489564-6489263 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 108

Conread position: 487-728
Cow position: chr7:61349798-61349565 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 100

Conread position: 488-642
Cow position: chr7:33406477-33406322 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 52

Conread position: 493-728
Cow position: chr7:1405659-1405418 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 58

Conread position: 523-756
Cow position: chr7:3729780-3730020 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 48

Show alignments to all cow chromosomes.