Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 1-112 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 1-129 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 5-130 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 287-641 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 15, 207 |
| Conread position: | 289-579 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 289-584 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-592 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 207 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-684 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 277 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 13, 319 |
| Conread position: | 289-712 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-712 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 289-752 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 289-752 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 289-756 |
| Cow position: | |
| Alignm length: | 489 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 293-728 |
| Cow position: | |
| Alignm length: | 461 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 293-756 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 296-578 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 26, 198 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 314 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 174 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 319 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 318 |
| Conread position: | 296-703 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 92, 306 |
| Conread position: | 296-728 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 6, 294 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 298-592 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 299-756 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 301-642 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 194 |
| Conread position: | 301-687 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 86, 192 |
| Conread position: | 301-756 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 302-666 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 303-631 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 303-728 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 306-704 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 312-756 |
| Cow position: | |
| Alignm length: | 459 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 321-451 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 321-537 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 321-581 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 162 |
| Conread position: | 321-592 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 121 |
| Conread position: | 321-719 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 321-722 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 321-728 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 193 |
| Conread position: | 321-728 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 321-728 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 274 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 73, 136 |
| Conread position: | 321-752 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 322-756 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 58, 124 |
| Conread position: | 323-666 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 323-756 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 157 |
| Conread position: | 328-577 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 328-704 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 124 |
| Conread position: | 330-531 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 128 |
| Conread position: | 330-642 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 57, 163 |
| Conread position: | 330-666 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 331-622 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 134, 14 |
| Conread position: | 334-660 |
| Cow position: | |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 334-661 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 344-750 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 344-751 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 345-530 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 141 |
| Conread position: | 345-644 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 346-632 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 346-666 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 136, 13 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 351-727 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 353-642 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 359-653 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 359-666 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 361-728 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 275 |
| Conread position: | 362-592 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 362-684 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 209 |
| Conread position: | 363-727 |
| Cow position: | |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 367-747 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 207 |
| Conread position: | 368-727 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 374-756 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 272 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 375-728 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 385-641 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 387-712 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 104 |
| Conread position: | 409-756 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 411-750 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 412-642 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 429-728 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 451-756 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 462-733 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 464-671 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 467-756 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 487-728 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 488-642 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 493-728 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 523-756 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 48 |
Show alignments to all cow chromosomes.