Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C120006.5 |
| Conread position: | 1-119 |
| Cow position: | |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-129 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 1-131 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 10-129 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 16-129 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 285-641 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 289-641 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 13, 215 |
| Conread position: | 289-642 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 296-582 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 167 |
| Conread position: | 296-582 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 90, 196 |
| Conread position: | 296-627 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 26, 167 |
| Conread position: | 296-642 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 398 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 15, 265 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 90, 317 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 299 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 319 |
| Conread position: | 296-730 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 319 |
| Conread position: | 296-751 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 296-756 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 315 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 26, 175 |
| Conread position: | 298-642 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 300-642 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 194 |
| Conread position: | 301-638 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 301-730 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 192 |
| Conread position: | 301-730 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 301-756 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 194 |
| Conread position: | 303-732 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 197 |
| Conread position: | 305-581 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 102 |
| Conread position: | 307-751 |
| Cow position: | |
| Alignm length: | 459 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 308-642 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 310-730 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 244 |
| Conread position: | 312-502 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 167 |
| Conread position: | 316-722 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 321-480 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 321-483 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 321-567 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 321-584 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 148 |
| Conread position: | 321-632 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 171 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 179 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 172 |
| Conread position: | 321-642 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 66, 172 |
| Conread position: | 321-666 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 321-681 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 139 |
| Conread position: | 321-684 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 65, 292 |
| Conread position: | 321-712 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 30, 173 |
| Conread position: | 321-712 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 172 |
| Conread position: | 321-728 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 215, 25 |
| Conread position: | 321-730 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 66, 172 |
| Conread position: | 321-750 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 321-756 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 68, 172 |
| Conread position: | 321-756 |
| Cow position: | |
| Alignm length: | 457 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 321-756 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 322-640 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 323-684 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 328-642 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 15, 142 |
| Conread position: | 328-730 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 330-642 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 215 |
| Conread position: | 330-665 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 57, 163 |
| Conread position: | 334-733 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 345-729 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 191, 37 |
| Conread position: | 345-756 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 345-756 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 191, 59 |
| Conread position: | 346-578 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 202 |
| Conread position: | 346-617 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 197 |
| Conread position: | 346-644 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 346-644 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 346-728 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 200 |
| Conread position: | 350-666 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 143 |
| Conread position: | 350-675 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 353-641 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 353-756 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 355-684 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 365-579 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 107 |
| Conread position: | 369-684 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 87, 235 |
| Conread position: | 369-701 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 374-722 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 162, 11 |
| Conread position: | 378-689 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 91 |
| Conread position: | 385-660 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 192 |
| Conread position: | 388-712 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 390-642 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 392-756 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 396-728 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 87 |
| Conread position: | 408-751 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 408-756 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 409-684 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 443-751 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 139 |
| Conread position: | 451-658 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 465-633 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.