Cow genome map

Conread name: Ss1.1-LyN1-MLN01C120006.5

Conread position: 1-119
Cow position: chrX:24175574-24175454 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 1-129
Cow position: chrX:19927538-19927669 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1-131
Cow position: chrX:30146356-30146225 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 122

Conread position: 3-130
Cow position: chrX:2787986-2787857 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 5-129
Cow position: chrX:31192530-31192404 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 287-642
Cow position: chrX:30710661-30711020 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 74

Conread position: 289-638
Cow position: chrX:25186967-25187322 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 13, 204

Conread position: 289-642
Cow position: chrX:970081-970432 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 175

Conread position: 289-642
Cow position: chrX:1546241-1546601 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 206

Conread position: 289-642
Cow position: chrX:15127936-15127575 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 252

Conread position: 289-684
Cow position: chrX:9007649-9008054 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 213

Conread position: 289-684
Cow position: chrX:15598236-15598642 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 274
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 206

Conread position: 289-712
Cow position: chrX:18955208-18954778 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 313

Conread position: 289-730
Cow position: chrX:2483329-2482872 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 293
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 98

Conread position: 289-750
Cow position: chrX:23456264-23455786 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 206

Conread position: 292-622
Cow position: chrX:31192445-31192126 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 7

Conread position: 292-751
Cow position: chrX:26428701-26428254 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 312
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 162, 19

Conread position: 296-524
Cow position: chrX:21305201-21304967 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 52

Conread position: 296-552
Cow position: chrX:6577011-6577272 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 213

Conread position: 296-567
Cow position: chrX:12704599-12704320 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 296-582
Cow position: chrX:5395649-5395356 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 296-625
Cow position: chrX:9173050-9172717 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 103

Conread position: 296-628
Cow position: chrX:3376905-3376571 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 44

Conread position: 296-628
Cow position: chrX:22610624-22610961 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 260

Conread position: 296-637
Cow position: chrX:29174283-29173939 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 175

Conread position: 296-642
Cow position: chrX:28506624-28506272 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 296-666
Cow position: chrX:7751220-7751591 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 26, 166

Conread position: 296-666
Cow position: chrX:13077376-13077002 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 243
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 168

Conread position: 296-666
Cow position: chrX:13097950-13097576 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 168

Conread position: 296-666
Cow position: chrX:21339716-21340093 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 26, 317

Conread position: 296-666
Cow position: chrX:24325830-24325453 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 45

Conread position: 296-675
Cow position: chrX:3422126-3421736 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 6, 284

Conread position: 296-677
Cow position: chrX:21489552-21489934 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 42

Conread position: 296-684
Cow position: chrX:2101181-2101571 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 166

Conread position: 296-684
Cow position: chrX:5284412-5284022 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 254
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 191

Conread position: 296-684
Cow position: chrX:5324395-5324011 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 165

Conread position: 296-684
Cow position: chrX:5862711-5863110 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 262
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 177

Conread position: 296-684
Cow position: chrX:9193328-9192932 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 26, 103

Conread position: 296-684
Cow position: chrX:12280942-12280543 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 260
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 306

Conread position: 296-684
Cow position: chrX:13398800-13398404 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 257
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 19

Conread position: 296-684
Cow position: chrX:18218715-18219109 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 59

Conread position: 296-684
Cow position: chrX:24088716-24089114 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 177

Conread position: 296-684
Cow position: chrX:28759306-28758915 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 257
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 167

Conread position: 296-684
Cow position: chrX:37848323-37848726 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 267
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 6, 324

Conread position: 296-703
Cow position: chrX:20360617-20360197 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 283

Conread position: 296-722
Cow position: chrX:28522384-28521942 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 286
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 308

Conread position: 296-728
Cow position: chrX:27427004-27426552 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 293
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 296-730
Cow position: chrX:3085585-3085135 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 295
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 86

Conread position: 296-730
Cow position: chrX:8586410-8586860 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 90, 303

Conread position: 296-730
Cow position: chrX:12341509-12341959 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 290
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 26, 308

Conread position: 296-730
Cow position: chrX:20316738-20316289 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 297
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 43

Conread position: 296-730
Cow position: chrX:24380621-24381077 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 322

Conread position: 296-730
Cow position: chrX:39521220-39521673 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 295
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 26, 319

Conread position: 296-750
Cow position: chrX:6873763-6873295 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 299
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 227

Conread position: 296-750
Cow position: chrX:12655433-12654979 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 289
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 147

Conread position: 296-756
Cow position: chrX:31187920-31187447 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 304
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 251

Conread position: 296-756
Cow position: chrX:33704565-33705035 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 298
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 27

Conread position: 297-684
Cow position: chrX:16363808-16363412 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 318

Conread position: 298-684
Cow position: chrX:2603366-2603761 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 108

Conread position: 298-684
Cow position: chrX:17479207-17478812 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 293

Conread position: 298-752
Cow position: chrX:22487501-22487975 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 324
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 26

Conread position: 299-642
Cow position: chrX:21222244-21222594 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 49

Conread position: 301-592
Cow position: chrX:23276439-23276736 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 244

Conread position: 301-605
Cow position: chrX:16017804-16017496 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 22

Conread position: 301-639
Cow position: chrX:38145380-38145724 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 30, 193

Conread position: 301-641
Cow position: chrX:6887032-6886702 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 37

Conread position: 301-642
Cow position: chrX:29854244-29853897 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 35, 193

Conread position: 301-722
Cow position: chrX:24139656-24139234 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 304-756
Cow position: chrX:2380106-2380571 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 124

Conread position: 312-756
Cow position: chrX:2787883-2787439 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 289

Conread position: 315-642
Cow position: chrX:23392267-23391935 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 229

Conread position: 316-684
Cow position: chrX:31079871-31080244 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 14

Conread position: 319-642
Cow position: chrX:7092946-7093265 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 67, 152

Conread position: 320-728
Cow position: chrX:30143045-30142626 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 26

Conread position: 321-587
Cow position: chrX:27409244-27409504 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 120

Conread position: 321-642
Cow position: chrX:26527316-26527642 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 66, 172

Conread position: 321-666
Cow position: chrX:12289592-12289249 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 15

Conread position: 321-684
Cow position: chrX:8669934-8670305 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 255

Conread position: 321-684
Cow position: chrX:11465657-11465289 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 242
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 148

Conread position: 321-684
Cow position: chrX:26401126-26400755 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 247
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 193

Conread position: 321-685
Cow position: chrX:16698642-16699013 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 282

Conread position: 321-712
Cow position: chrX:13413775-13413371 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 266
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 172

Conread position: 321-712
Cow position: chrX:41151568-41151970 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 66, 171

Conread position: 321-728
Cow position: chrX:18532346-18532762 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 171

Conread position: 321-730
Cow position: chrX:32466594-32467018 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 173

Conread position: 321-741
Cow position: chrX:22619973-22619532 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 281

Conread position: 321-756
Cow position: chrX:19927654-19928096 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 249

Conread position: 321-756
Cow position: chrX:21270825-21270396 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 141

Conread position: 321-756
Cow position: chrX:29813055-29813507 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 297
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 176

Conread position: 322-728
Cow position: chrX:30145865-30145452 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 16

Conread position: 323-666
Cow position: chrX:22526259-22525912 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 251

Conread position: 323-756
Cow position: chrX:17632483-17632025 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 324-509
Cow position: chrX:12998241-12998054 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 58

Conread position: 324-611
Cow position: chrX:32467525-32467807 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 212, 64

Conread position: 326-684
Cow position: chrX:8454105-8454464 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 34

Conread position: 328-684
Cow position: chrX:30056024-30056383 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 150, 59

Conread position: 328-684
Cow position: chrX:30666591-30666226 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 285

Conread position: 328-756
Cow position: chrX:8479053-8479499 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 296
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 62, 216

Conread position: 329-684
Cow position: chrX:15180087-15179717 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 239
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 329-746
Cow position: chrX:20698914-20698494 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 48, 129

Conread position: 330-638
Cow position: chrX:26759241-26758928 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 88

Conread position: 332-730
Cow position: chrX:28635062-28634650 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 243

Conread position: 333-726
Cow position: chrX:32430031-32430447 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 219

Conread position: 333-728
Cow position: chrX:20795965-20796368 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 334-579
Cow position: chrX:29284090-29284340 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 7

Conread position: 340-703
Cow position: chrX:7029549-7029925 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 248
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 47, 274

Conread position: 345-660
Cow position: chrX:11669066-11668755 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 78

Conread position: 346-625
Cow position: chrX:11534852-11535133 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 228

Conread position: 346-666
Cow position: chrX:13007262-13006941 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 15

Conread position: 346-666
Cow position: chrX:21290119-21289799 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 30, 69

Conread position: 346-666
Cow position: chrX:24137029-24136702 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 198

Conread position: 346-728
Cow position: chrX:5834795-5834406 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 107

Conread position: 346-728
Cow position: chrX:20803505-20803890 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 31, 121

Conread position: 346-728
Cow position: chrX:24122552-24122154 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 267
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 31, 198

Conread position: 346-733
Cow position: chrX:15309887-15309487 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 246
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 343

Conread position: 346-733
Cow position: chrX:21602255-21602652 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 15

Conread position: 346-733
Cow position: chrX:21633214-21632814 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 110, 118

Conread position: 348-728
Cow position: chrX:22131323-22130938 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 141

Conread position: 348-728
Cow position: chrX:37757158-37757537 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 28, 50

Conread position: 351-730
Cow position: chrX:30179614-30179227 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 97

Conread position: 353-674
Cow position: chrX:26628942-26628618 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 105

Conread position: 356-733
Cow position: chrX:27990401-27990013 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 23, 184

Conread position: 356-756
Cow position: chrX:24114790-24114385 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 263
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 5

Conread position: 362-642
Cow position: chrX:5337189-5336903 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 252

Conread position: 364-708
Cow position: chrX:25332464-25332830 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 49

Conread position: 364-728
Cow position: chrX:22777702-22778076 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 99, 15

Conread position: 365-660
Cow position: chrX:4795309-4795604 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 93

Conread position: 369-756
Cow position: chrX:17668894-17668488 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 5

Conread position: 371-684
Cow position: chrX:23046537-23046858 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 15, 172

Conread position: 378-638
Cow position: chrX:29092903-29093167 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 114

Conread position: 408-642
Cow position: chrX:30184459-30184227 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 84

Conread position: 409-756
Cow position: chrX:28875960-28875623 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 46, 14

Conread position: 414-666
Cow position: chrX:10532123-10531866 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 197

Conread position: 416-673
Cow position: chrX:6909897-6909635 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 75

Conread position: 433-642
Cow position: chrX:27494159-27494374 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 58

Conread position: 463-707
Cow position: chrX:26504681-26504929 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 72

Conread position: 488-756
Cow position: chrX:12998049-12997772 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 75

Conread position: 489-748
Cow position: chrX:24481974-24481697 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 508-756
Cow position: chrX:41889368-41889109 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 72

Conread position: 558-747
Cow position: chrX:10418588-10418383 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 575-751
Cow position: chrX:32468319-32468498 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 159

Show alignments to all cow chromosomes.