Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 13-337 |
| Cow position: | chr10:62216788-62216469 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 13-406 |
| Cow position: | chr10:32650915-32650529 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 13-433 |
| Cow position: | chr10:62778529-62778112 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 13-463 |
| Cow position: | chr10:47063595-47063165 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 141 |
| Conread position: | 14-345 |
| Cow position: | chr10:19215612-19215283 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 25-450 |
| Cow position: | chr10:21740583-21741004 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 270, 45 |
| Conread position: | 26-263 |
| Cow position: | chr10:51215515-51215285 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 52-484 |
| Cow position: | chr10:13422598-13423025 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 112 |
| Conread position: | 62-343 |
| Cow position: | chr10:6168126-6167850 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 74-473 |
| Cow position: | chr10:47967507-47967894 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 76-387 |
| Cow position: | chr10:37872010-37872322 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 98-288 |
| Cow position: | chr10:23353017-23353208 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 100-371 |
| Cow position: | chr10:58664675-58664403 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 117-384 |
| Cow position: | chr10:65308201-65307931 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 178, 35 |
| Conread position: | 144-311 |
| Cow position: | chr10:23133358-23133191 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 158 |
| Conread position: | 413-573 |
| Cow position: | chr10:21923278-21923435 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 456-578 |
| Cow position: | chr10:15601980-15602101 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 577-931 |
| Cow position: | chr10:47063178-47062820 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 144 |
| Conread position: | 1093-1274 |
| Cow position: | chr10:47062820-47062640 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1093-1282 |
| Cow position: | chr10:13027130-13027322 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.