Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 13-306 |
| Cow position: | chr11:54209437-54209147 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 13-440 |
| Cow position: | chr11:17107866-17108286 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 120 |
| Conread position: | 13-440 |
| Cow position: | chr11:19064430-19064850 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 282, 131 |
| Conread position: | 13-450 |
| Cow position: | chr11:67846751-67847184 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 134 |
| Conread position: | 25-346 |
| Cow position: | chr11:36744373-36744693 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 25-440 |
| Cow position: | chr11:57628239-57628647 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 270, 137 |
| Conread position: | 25-473 |
| Cow position: | chr11:20920938-20921381 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 27-376 |
| Cow position: | chr11:54434535-54434175 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 136 |
| Conread position: | 28-377 |
| Cow position: | chr11:21466881-21466530 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 192, 130 |
| Conread position: | 49-372 |
| Cow position: | chr11:34750514-34750184 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 101, 86 |
| Conread position: | 54-370 |
| Cow position: | chr11:9580759-9581080 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 62, 49 |
| Conread position: | 64-307 |
| Cow position: | chr11:39429204-39428961 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 67-318 |
| Cow position: | chr11:35430005-35430257 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 132, 86 |
| Conread position: | 76-369 |
| Cow position: | chr11:4626391-4626684 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 219, 91 |
| Conread position: | 97-346 |
| Cow position: | chr11:81580779-81581023 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 9 |
| Conread position: | 122-473 |
| Cow position: | chr11:53679317-53678955 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 153 |
| Conread position: | 456-578 |
| Cow position: | chr11:16315081-16314959 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.