Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 13-344 |
| Cow position: | chr13:33824845-33825175 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 13-439 |
| Cow position: | chr13:15520629-15521056 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 13-450 |
| Cow position: | chr13:21840308-21840747 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 25-450 |
| Cow position: | chr13:4872950-4872528 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr13:30244860-30245285 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 46-372 |
| Cow position: | chr13:49554313-49553989 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 75, 57 |
| Conread position: | 49-281 |
| Cow position: | chr13:4787776-4787550 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 50-338 |
| Cow position: | chr13:38843294-38843584 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 220, 87 |
| Conread position: | 55-472 |
| Cow position: | chr13:7596898-7596477 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 67-277 |
| Cow position: | chr13:46271013-46270805 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 67-371 |
| Cow position: | chr13:41526892-41527179 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 231, 57 |
| Conread position: | 69-270 |
| Cow position: | chr13:33936214-33936016 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 76-302 |
| Cow position: | chr13:19615652-19615872 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 103-377 |
| Cow position: | chr13:51458394-51458132 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 122-281 |
| Cow position: | chr13:3679678-3679833 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 116 |
| Conread position: | 122-346 |
| Cow position: | chr13:4531234-4531459 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 128-289 |
| Cow position: | chr13:42113260-42113419 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 456-585 |
| Cow position: | chr13:20654099-20653970 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-578 |
| Cow position: | chr13:20854691-20854574 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 105, 10 |
Show alignments to all cow chromosomes.