Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 12-352 |
| Cow position: | chr15:35578267-35578605 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 167, 127 |
| Conread position: | 13-359 |
| Cow position: | chr15:1782018-1781669 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 13-450 |
| Cow position: | chr15:18268223-18268654 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 15-346 |
| Cow position: | chr15:1772259-1771930 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 280, 48 |
| Conread position: | 15-450 |
| Cow position: | chr15:1519389-1519819 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 360, 48 |
| Conread position: | 25-346 |
| Cow position: | chr15:22204362-22204685 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 25-450 |
| Cow position: | chr15:4196214-4195796 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 25-450 |
| Cow position: | chr15:13428790-13428375 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr15:20749166-20748739 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 270, 137 |
| Conread position: | 25-450 |
| Cow position: | chr15:36970675-36970250 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 270, 119 |
| Conread position: | 25-476 |
| Cow position: | chr15:2647905-2648350 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 270, 133 |
| Conread position: | 27-380 |
| Cow position: | chr15:13481240-13481591 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 50-339 |
| Cow position: | chr15:29009569-29009281 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 245, 102 |
| Conread position: | 50-346 |
| Cow position: | chr15:21877631-21877926 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 245, 102 |
| Conread position: | 62-334 |
| Cow position: | chr15:7969295-7969565 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 64, 99 |
| Conread position: | 75-346 |
| Cow position: | chr15:11598413-11598686 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 220, 77 |
| Conread position: | 426-578 |
| Cow position: | chr15:36435040-36435190 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 5, 27 |
| Conread position: | 445-586 |
| Cow position: | chr15:15147353-15147212 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-578 |
| Cow position: | chr15:242070-241952 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.