Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 13-439 |
| Cow position: | chr18:28973702-28974125 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 13-450 |
| Cow position: | chr18:19352587-19352146 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 14-464 |
| Cow position: | chr18:35801519-35801955 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 15-305 |
| Cow position: | chr18:33953370-33953656 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 280, 147 |
| Conread position: | 25-377 |
| Cow position: | chr18:51689813-51689462 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 132, 143 |
| Conread position: | 25-477 |
| Cow position: | chr18:22602676-22602229 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 26-381 |
| Cow position: | chr18:16537062-16536717 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 262, 99 |
| Conread position: | 28-307 |
| Cow position: | chr18:36484433-36484161 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 84, 34 |
| Conread position: | 28-374 |
| Cow position: | chr18:48452719-48452373 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 279, 26 |
| Conread position: | 62-281 |
| Cow position: | chr18:37525445-37525223 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 63-281 |
| Cow position: | chr18:20801347-20801556 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 76-331 |
| Cow position: | chr18:29955374-29955130 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 97-256 |
| Cow position: | chr18:13356993-13356834 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 123-432 |
| Cow position: | chr18:32305922-32305609 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 143-371 |
| Cow position: | chr18:27005081-27005310 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 149, 19 |
| Conread position: | 457-559 |
| Cow position: | chr18:22180592-22180694 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-578 |
| Cow position: | chr18:52251672-52251786 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.