Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01D030025.5 |
| Conread position: | 11-374 |
| Cow position: | chr21:38857887-38858238 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 13-346 |
| Cow position: | chr21:11505869-11505533 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 25-300 |
| Cow position: | chr21:6339835-6339562 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-300 |
| Cow position: | chr21:8678091-8678364 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 270, 127 |
| Conread position: | 25-346 |
| Cow position: | chr21:11453387-11453707 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr21:12055732-12056153 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr21:26638196-26638612 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 270, 122 |
| Conread position: | 25-450 |
| Cow position: | chr21:37045179-37044763 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 270, 76 |
| Conread position: | 26-371 |
| Cow position: | chr21:7258900-7258572 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 27-344 |
| Cow position: | chr21:30599657-30599967 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 41-354 |
| Cow position: | chr21:4133124-4133431 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 67-338 |
| Cow position: | chr21:3615519-3615253 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 228, 91 |
| Conread position: | 101-377 |
| Cow position: | chr21:29754856-29754591 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 206, 51 |
| Conread position: | 106-440 |
| Cow position: | chr21:27708951-27708623 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 189, 41 |
| Conread position: | 125-473 |
| Cow position: | chr21:457246-456920 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 192-380 |
| Cow position: | chr21:44847298-44847109 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 83 |
| Conread position: | 450-578 |
| Cow position: | chr21:31278482-31278353 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 461-591 |
| Cow position: | chr21:38918484-38918354 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.